|
| Status |
Public on Jun 09, 2023 |
| Title |
NEJ723 |
| Sample type |
SRA |
| |
|
| Source name |
liver tissue
|
| Organism |
Mus musculus |
| Characteristics |
tissue: liver
disease state: hepatoblastoma murine model
|
| Extracted molecule |
polyA RNA |
| Extraction protocol |
cDNA and Library was prepared following 3' Single cell Expression V3 from 10X Genomics.
|
| |
|
| Library strategy |
RNA-Seq |
| Library source |
transcriptomic single cell |
| Library selection |
cDNA |
| Instrument model |
Illumina NovaSeq 6000 |
| |
|
| Description |
tissue-NEJ723
Single Cells_NEJ723
Single cells was captured and cDNA processed by 3' Single Gene expression kit V3.1- 10X Genomics
|
| Data processing |
Cell Ranger 6.0 used to generate Fastq, end count and matrix files that used further analyzes.
|
| |
|
| Submission date |
Jan 25, 2023 |
| Last update date |
Jun 09, 2023 |
| Contact name |
Jun Yang |
| Organization name |
St.Jude Children's Research Hospital
|
| Department |
Surgery
|
| Street address |
262 Danny Thomas Place
|
| City |
Memphis |
| State/province |
TN |
| ZIP/Postal code |
38103 |
| Country |
USA |
| |
|
| Platform ID |
GPL24247 |
| Series (1) |
|
| Relations |
| BioSample |
SAMN32909074 |
| SRA |
SRX19166659 |
