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GEO accession:
Series GSE228800
Query DataSets for GSE228800
Status
Public on Jan 01, 2024
Title
PAF1c links S-phase progression to immune evasion and MYC function in pancreatic carcinoma
Organism
Mus musculus
Experiment type
Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Other
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
38365788
https://doi.org/10.1038%2Fs41467-024-45760-8
Submission date
Apr 03, 2023
Last update date
Feb 26, 2024
Contact name
Martin Eilers
Organization name
University of Wuerzburg
Department
Chair for Biochemistry and Molecular Biology
Lab
Martin Eilers
Street address
Am Hubland
City
Wuerzburg
ZIP/Postal code
97074
Country
Germany
Platforms (1)
GPL30172
NextSeq 2000 (Mus musculus)
Samples (54)
Less...
More...
GSM7136972
ChIP-seq RNAPII shCTR9 EtOH
GSM7136973
ChIP-seq RNAPII shCTR9 Dox
GSM7136974
ChIP-seq CTR9 shCTR9 EtOH
GSM7136975
ChIP-seq CTR9 shCTR9 Dox
GSM7136977
ChIP-seq SPT5 shCTR9 EtOH
GSM7136978
ChIP-seq SPT5 shCTR9 Dox
GSM7136979
ChIP-seq SPT6 shCTR9 EtOH
GSM7136980
ChIP-seq SPT6 shCTR9 Dox
GSM7136981
ChIP-seq Input merged
GSM7136982
CUT&RUN MYC shCTR9 EtOH
GSM7136983
CUT&RUN MYC shCTR9 Dox
GSM7136985
CUT&RUN MYC shMYC EtOH
GSM7136986
CUT&RUN MYC shMYC Dox
GSM7136987
CUT&RUN IgG shCTR9 EtOH
GSM7137684
RNA-seq shLuciferase Dox rep1
GSM7137686
RNA-seq shLuciferase Dox rep2
GSM7137687
RNA-seq shLuciferase Dox rep3
GSM7137688
RNA-seq shCTR9 Dox rep1
GSM7137689
RNA-seq shCTR9 Dox rep2
GSM7137690
RNA-seq shCTR9 Dox rep3
GSM7137691
RNA-seq shMYC Dox rep1
GSM7137693
RNA-seq shMYC Dox rep2
GSM7137694
RNA-seq shMYC Dox rep3
GSM7137695
RNA-seq shCDC73 Dox rep1
GSM7137696
RNA-seq shCDC73 Dox rep2
GSM7137697
RNA-seq shCDC73 Dox rep3
GSM7138383
BLISS shMYC EtOH rep1
GSM7138384
BLISS shMYC EtOH rep2
GSM7138385
BLISS shMYC EtOH rep3
GSM7138386
BLISS shMYC Dox rep1
GSM7138387
BLISS shMYC Dox rep2
GSM7138389
BLISS shMYC Dox rep3
GSM7138390
BLISS shMYC EtOH AZD6738 rep1
GSM7138391
BLISS shMYC EtOH AZD6738 rep2
GSM7138392
BLISS shMYC EtOH AZD6738 rep3
GSM7138393
BLISS shMYC Dox AZD6738 rep1
GSM7138394
BLISS shMYC Dox AZD6738 rep2
GSM7138395
BLISS shMYC Dox AZD6738 rep3
GSM7794505
4sU-seq shLuciferase Dox rep1
GSM7794506
4sU-seq shLuciferase Dox rep2
GSM7794508
4sU-seq shLuciferase Dox rep3
GSM7794509
4sU shCTR9 Dox rep1
GSM7794510
4sU shCTR9 Dox rep2
GSM7794511
4sU shCTR9 Dox rep3
GSM7794514
ChIP-seq RNAPII shCTR9 EtOH rep2
GSM7794515
ChIP-seq RNAPII shCTR9 Dox rep2
GSM7794516
ChIP-seq SPT5 shCTR9 EtOH rep2
GSM7794517
ChIP-seq SPT5 shCTR9 Dox rep2
GSM7794518
ChIP-seq SPT6 shCTR9 EtOH rep2
GSM7794519
ChIP-seq SPT6 shCTR9 Dox rep2
GSM7794520
ChIP-seq Input merged rep2
GSM7794521
ChIP-seq CTR9 shCTR9 EtOH rep2
GSM7794522
CUT&RUN MYC shCTR9 EtOH rep2
GSM7794523
CUT&RUN MYC shCTR9 Dox rep2
This SuperSeries is composed of the following SubSeries:
Less...
More...
GSE228795
PAF1c links S-phase progression to immune evasion and MYC function in pancreatic carcinoma [CUTnRun and ChIP]
GSE228797
PAF1c links S-phase progression to immune evasion and MYC function in pancreatic carcinoma [RNA-seq]
GSE228799
PAF1c links S-phase progression to immune evasion and MYC function in pancreatic carcinoma [BLISS]
GSE243701
PAF1c links S-phase progression to immune evasion and MYC function in pancreatic carcinoma [4sU-seq]
GSE243703
PAF1c links S-phase progression to immune evasion and MYC function in pancreatic carcinoma [ChIP-seq/CUT&RUN]
Relations
BioProject
PRJNA951659
Download family
Format
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Supplementary file
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File type/resource
GSE228800_RAW.tar
3.7 Gb
(http)
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