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Series GSE230475 Query DataSets for GSE230475
Status Public on May 23, 2023
Title Broadly-applicable control approaches improve accuracy of ChIP-seq data
Organism Saccharomyces cerevisiae
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary Chromatin immunoprecipitation DNA-sequencing (ChIP-seq) with and without designed internal controls.
 
Overall design Chromatin immunoprecipitation DNA-sequencing (ChIP-seq) with and without designed internal controls.
Web link https://www.mdpi.com/1422-0067/24/11/9271
 
Contributor(s) Petrie MV, He Y, Gan Y, Ostrow AZ, Aparicio OM
Citation(s) 37298223
Submission date Apr 24, 2023
Last update date Sep 17, 2023
Contact name Meghan V Petrie
E-mail(s) mpetrie@usc.edu
Organization name University of Southern California
Department Molecular Biology
Street address 1050 Childs Way
City Los Angeles
State/province CA
ZIP/Postal code 90089-2910
Country USA
 
Platforms (1)
GPL27812 Illumina NovaSeq 6000 (Saccharomyces cerevisiae)
Samples (60)
GSM7224930 Untag_FLAG_rep1
GSM7224931 Untag_FLAG_rep2
GSM7224932 Untag_FLAG_rep3
Relations
BioProject PRJNA961187

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE230475_RAW.tar 78.2 Mb (http)(custom) TAR (of BED)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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