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Series GSE234399 Query DataSets for GSE234399
Status Public on Aug 30, 2023
Title Gene expression in the liver and lungs of healthy, SIV-infected and ART-treated rhesus macaques
Organism Macaca mulatta
Experiment type Expression profiling by high throughput sequencing
Summary Herein, we used rhesus macaques (RMs) infected with SIVmac251 to analyze the transcriptomic profiles of the liver and lungs of untreated and early antiretroviral therapy (ART)-treated RMs, compared to healthy uninfected RMs.
 
Overall design RNA sequencing was performed in total liver and lung cells from healthy uninfected (n=3), high viremic SIVmac251-infected (n=4), low viremic SIVmac51-infected (n=4) and ART-treated (n=3) rhesus macaques using NovaSeq 6000 flowcell S1 at the Next-Generation Sequencing Platform, Genomics Center (CHU de Québec-Université Laval Research Center, Québec City, Canada).
 
Contributor(s) Clain J, Beauparlant CJ, Droit A, Estaquier J
Citation(s) 37485876
Submission date Jun 07, 2023
Last update date Aug 30, 2023
Contact name Jérôme Estaquier
E-mail(s) Jerome.Estaquier@crchudequebec.ulaval.ca
Organization name Centre de Recherche du CHU de Québec-Université Laval
Street address 2705 Boulevard Laurier
City Québec
State/province Québec
ZIP/Postal code G1V4G2
Country Canada
 
Platforms (1)
GPL27943 Illumina NovaSeq 6000 (Macaca mulatta)
Samples (28)
GSM7466774 PB057_Liver_healthy
GSM7466775 PB061_Liver_healthy
GSM7466776 PB069_Liver_healthy
Relations
BioProject PRJNA981180

Download family Format
SOFT formatted family file(s) SOFTHelp
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE234399_TPM_all_sample_Clain_et_al_2023.xlsx 6.5 Mb (ftp)(http) XLSX
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Raw data are available in SRA
Processed data are available on Series record

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