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Series GSE235488 Query DataSets for GSE235488
Status Public on Jun 22, 2023
Title Human HFF cells large rearrangements detection after CRISPR-Cas9 nuclease (Fig. 5e)
Organism Homo sapiens
Experiment type Genome variation profiling by genome tiling array
Genome variation profiling by SNP array
Summary ABRAXAS2 or SORSC1 gene editing by CRISPR-Cas9 nuclease in heterozygous HFF KO P53 for UROS inactivation. Fluorescent positive cell sorting for UROS and large rearrangements confirmation in chromosome 10q.
 
Overall design Two-condition experiment, florescent-positive clones HFF KO P53 edited vs fluorescent-negative HFF KO P53 edited bulk after ABRAXAS2 or SORSC1 gene editsing.
 
Contributor(s) Boutin J, Pennamen P
Citation(s) 37429857
Submission date Jun 21, 2023
Last update date Sep 12, 2023
Contact name Julian Boutin
E-mail(s) julian.boutin@u-bordeaux.fr
Organization name INSERM U1312 BRIC
Lab BioGO team 8
Street address 146 rue Leo Saignat
City Bordeaux
State/province Nouvelle Aquitaine
ZIP/Postal code 33000
Country France
 
Platforms (1)
GPL17052 Agilent-021924 SurePrint G3 Human CGH Microarray 8x60K (Probe Name version)
Samples (2)
GSM7503662 HFF KO P53 ABRAXAS2 transfected clone
GSM7503663 HFF KO P53 SORSC1 transfected clone
Relations
BioProject PRJNA986146

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE235488_5e.txt.gz 73.0 Kb (ftp)(http) TXT
GSE235488_RAW.tar 12.9 Mb (http)(custom) TAR (of TXT)
Processed data are available on Series record

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