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Series GSE235560 Query DataSets for GSE235560
Status Public on Jan 30, 2024
Title Loop-extruding Smc5/6 organizes transcription-induced positive DNA supercoils.
Organism Saccharomyces cerevisiae
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Other
Expression profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 38295804
Submission date Jun 22, 2023
Last update date May 08, 2024
Contact name Kristian Jeppsson
E-mail(s) kristian.jeppsson@ki.se
Organization name Krolinska Institute
Department Department of Cell and Molecular Biology
Street address 3-1-1 Koyadai
City Stockholm
ZIP/Postal code 17177
Country Sweden
 
Platforms (3)
GPL13821 Illumina HiSeq 2000 (Saccharomyces cerevisiae)
GPL17342 Illumina HiSeq 2500 (Saccharomyces cerevisiae)
GPL26171 HiSeq X Ten (Saccharomyces cerevisiae)
Samples (75)
GSM7505191 Smc6-FLAG, IP [2019_030B_3067-1_IP]
GSM7505192 Smc6-FLAG, Input [2019_030B_3067-1_WCE]
GSM7505193 Smc6-FLAG Scc2-AID, IP [2019_030B_3541-1_IP]
This SuperSeries is composed of the following SubSeries:
GSE235557 Loop-extruding Smc5/6 organizes transcription-induced positive DNA supercoils [ChIP-seq]
GSE235558 Loop-extruding Smc5/6 organizes transcription-induced positive DNA supercoils [Hi-C]
GSE235559 Loop-extruding Smc5/6 organizes transcription-induced positive DNA supercoils [RNA-seq]
Relations
BioProject PRJNA986453

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE235560_RAW.tar 548.1 Mb (http)(custom) TAR (of BW, HIC, TXT, WIG)
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