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Series GSE237343 Query DataSets for GSE237343
Status Public on Jul 24, 2023
Title intact Hi-C from placenta (ENCSR395DZW)
Project ENCODE
Organism Homo sapiens
Experiment type Other
Summary human placenta intact hi-c dnase

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf
 
Overall design https://www.encodeproject.org/ENCSR395DZW/
 
Citation(s) 22955616
BioProject PRJNA30709
Submission date Jul 14, 2023
Last update date Jul 26, 2023
Contact name ENCODE DCC
E-mail(s) encode-help@lists.stanford.edu
Organization name ENCODE DCC
Street address 300 Pasteur Dr
City Stanford
State/province CA
ZIP/Postal code 94305-5120
Country USA
 
Platforms (1)
GPL30173 NextSeq 2000 (Homo sapiens)
Samples (2)
GSM7610349 intact Hi-C from placenta (ENCLB714FVM)
GSM7610350 intact Hi-C from placenta (ENCLB031OLS)

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE237343_ENCFF117SSN_loops_GRCh38.bedpe.gz 795.9 Kb (ftp)(http) BEDPE
GSE237343_ENCFF185BEY_contact_domains_GRCh38.bedpe.gz 212.5 Kb (ftp)(http) BEDPE
GSE237343_ENCFF490GGL_mapping_quality_thresholded_contact_matrix_GRCh38.hic.gz 30.0 Gb (ftp)(http) HIC
GSE237343_ENCFF530BUJ_pairs_GRCh38.pairs.gz 9.2 Gb (ftp)(http) PAIRS
GSE237343_ENCFF784LDT_nuclease_cleavage_frequency_GRCh38.bigWig 4.6 Gb (ftp)(http) BIGWIG
GSE237343_ENCFF796RKZ_contact_matrix_GRCh38.hic.gz 32.8 Gb (ftp)(http) HIC
GSE237343_RAW.tar 10.0 Kb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
Processed data are available on Series record

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