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Series GSE239368 Query DataSets for GSE239368
Status Public on Nov 04, 2023
Title Changes in gene expression time 0 vs. 1hr post-cataract sugery wounding in the lens
Organism Gallus gallus
Experiment type Expression profiling by high throughput sequencing
Summary Early changes in the transcriptome associated with lens wounding in an ex vivo post-cataract surgery chicken model. Here we report the changes in the transcriptome that occur 1hr vs. time 0 post-cataract surgery wounding. Our data provide a molecular framework for understanding the early gene changes associated with the injury response of the lens.
 
Overall design To determine changes in the transcriptome that occur time 0 compared to 1 hour (1h) post lens wounding.
We here report the changes in the transcriptome that occur 1hr vs. time 0 post-cataract surgery wounding.
Comparative gene expression profiling analysis of RNAseq data for ex vivo chick post-cataract surgery explants performed at time 0 and 1h post-injury
 
Contributor(s) Walker JL, Basta MD
Citation(s) 38002297
Submission date Jul 26, 2023
Last update date Dec 08, 2023
Contact name Janice Lynn Walker
E-mail(s) janice.l.walker@jefferson.edu
Phone 215-503-5903
Organization name Thomas Jefferson University
Department Pathology and Genomic Medicine
Street address 1020 Locust Street; 571 JAH
City Philadelphia
State/province PA
ZIP/Postal code 19107
Country USA
 
Platforms (1)
GPL26853 Illumina NovaSeq 6000 (Gallus gallus)
Samples (6)
GSM7663747 Time 0 post-wounding, biol. rep 1
GSM7663748 Time 0 post-wounding, biol. rep 2
GSM7663749 Time 0 post-wounding, biol. rep 3
Relations
BioProject PRJNA998907

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE239368_OneHourvsT0_deg.txt.gz 3.0 Mb (ftp)(http) TXT
GSE239368_gene_count_Time0and1h.xlsx 1.9 Mb (ftp)(http) XLSX
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Raw data are available in SRA
Processed data are available on Series record

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