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Series GSE243830 Query DataSets for GSE243830
Status Public on Sep 23, 2023
Title Response of the amnion to intrauterine inflammation and effects of inhibition of TNF signaling in preterm Rhesus macaque
Organisms Macaca mulatta; Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary We demonstrate that during chorioamnionitis the amnion transcriptome is dominated by immune and inflammation related genes, largely driven by the NF-kB pathway. The amnion mesenchymal cells expressing We demonstrated that during chorioamnionitis the amnion transcriptome is dominated by immune and inflammation related genes, largely driven by the NF-kB pathway. CD14 and other myeloid cell markers increase in number with increased expression of innate immune activation markers during intrauterine infections.
 
Overall design We compared transcriptomics of the amnion in a preterm rhesus macaque model of IUI-induced by lypopolysaccharide with human cohorts of chorioamnionitis.
Web link https://www.cell.com/iscience/fulltext/S2589-0042(23)02195-8
 
Contributor(s) Presicce P, Cappelletti M, Morselli M, Ma F, Senthamaraikannan P, Protti G, Nadel BB, Aryan L, Eghbali M, Lukasz S, Pithia N, De Franco E, Miller LA, Pellegrini M, Jobe AH, Chougnet CA, Kallapur SG
Citation(s) 37953944
NIH grant(s)
Grant ID Grant title Affiliation Name
U01 ES029234 Prenatal inflammatory exposures and neonatal immune development CHILDREN'S HOSPITAL MEDICAL CENTER Claire A Chougnet
R01 HD098389 Anti-inflammatory drug target to reduce adverse pregnancy outcomes. UNIVERSITY OF CALIFORNIA LOS ANGELES Suhas Kallapur
Submission date Sep 22, 2023
Last update date Dec 27, 2023
Contact name Suhas G Kallapur
Organization name UCLA
Street address 10833 Le Conte Avenue
City Los Angeles
ZIP/Postal code 90095
Country USA
 
Platforms (2)
GPL24676 Illumina NovaSeq 6000 (Homo sapiens)
GPL27943 Illumina NovaSeq 6000 (Macaca mulatta)
Samples (38)
GSM7796202 H1023
GSM7796203 H1024
GSM7796204 H1030B
Relations
BioProject PRJNA1020127

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE243830_Bulk_RNA-seq_Raw_counts_Human_Amnion_Presicce.txt.gz 961.2 Kb (ftp)(http) TXT
GSE243830_Bulk_RNA-seq_Raw_counts_Rhesus_Amnion_Presicce.txt.gz 524.5 Kb (ftp)(http) TXT
GSE243830_RAW.tar 75.4 Mb (http)(custom) TAR (of TAR)
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Raw data are available in SRA

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