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| Status |
Public on Aug 05, 2024 |
| Title |
THE EPIGENOME PLAYS A MAJOR ROLE IN TOMATO 3D CHROMATIN ORGANIZATION |
| Organism |
Solanum lycopersicum |
| Experiment type |
Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Other
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| Summary |
This SuperSeries is composed of the SubSeries listed below.
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| Overall design |
Refer to individual Series
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| Citation(s) |
39149894 |
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| Submission date |
Sep 24, 2023 |
| Last update date |
Oct 10, 2024 |
| Contact name |
Xiaoning HE |
| E-mail(s) |
xiaoning.he@universite-paris-saclay.fr
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| Organization name |
IPS2
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| Street address |
630 Rue Noetzlin
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| City |
Gif-sur-Yvette |
| ZIP/Postal code |
91190 |
| Country |
France |
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| Platforms (1) |
| GPL21762 |
Illumina NextSeq 500 (Solanum lycopersicum) |
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| Samples (17)
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| GSM7798179 |
Mutant fourth leaves,1-month-old,H3K27me3,rep1 |
| GSM7798180 |
Mutant fourth leaves,1-month-old,H3K27me1 |
| GSM7798181 |
Mutant fourth leaves,1-month-old,H3K9me2 |
| GSM7798182 |
Fourth leaves,WT, rep1 |
| GSM7798183 |
Fourth leaves,WT, rep2 |
| GSM7798184 |
Fourth leaves,mutant, rep1 |
| GSM7798185 |
Fourth leaves,mutant, rep2 |
| GSM7798189 |
Mutant fourth leaves,1-month-old,rep1 |
| GSM7798190 |
Mutant fourth leaves,1-month-old,rep2 |
| GSM8005312 |
WT fourth leaves, 1-month-old, rep1 |
| GSM8005313 |
WT fourth leaves, 1-month-old, rep2 |
| GSM8244456 |
WT fourth leaves,1-month-old,H3K9ac |
| GSM8244457 |
Mutant fourth leaves,1-month-old,H3K9ac |
| GSM8244458 |
Mutant fourth leaves,1-month-old,H3K27me3,rep2 |
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| This SuperSeries is composed of the following SubSeries: |
| GSE243908 |
THE EPIGENOME PLAYS A MAJOR ROLE IN TOMATO 3D CHROMATIN ORGANIZATION [ChIP-seq] |
| GSE243909 |
THE EPIGENOME PLAYS A MAJOR ROLE IN TOMATO 3D CHROMATIN ORGANIZATION [Hi-C] |
| GSE243910 |
THE EPIGENOME PLAYS A MAJOR ROLE IN TOMATO 3D CHROMATIN ORGANIZATION [RNA-seq] |
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| Relations |
| BioProject |
PRJNA1020553 |
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