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GEO help: Mouse over screen elements for information. |
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| Status |
Public on Apr 22, 2016 |
| Title |
Illumina NextSeq 500 (Solanum lycopersicum) |
| Technology type |
high-throughput sequencing |
| Distribution |
virtual |
| Organism |
Solanum lycopersicum |
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| Submission date |
Apr 22, 2016 |
| Last update date |
Mar 22, 2019 |
| Contact name |
GEO |
| Country |
USA |
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| Samples (484)
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GSM2131175, GSM2131176, GSM2131177, GSM2131178, GSM2131179, GSM2131180
GSM2131181, GSM2131182, GSM2704261, GSM2704262, GSM3577213, GSM3577214, GSM3577215, GSM3577216, GSM3577217, GSM3577218, GSM3577219, GSM3577220, GSM3597331, GSM3597332, GSM3597333, GSM3597334, GSM3597335, GSM3597336, GSM3597337, GSM3597338, GSM3597339, GSM3597340, GSM3682339, GSM3682340, GSM3682341, GSM3682344, GSM3682345, GSM3682346, GSM3682348, GSM3682349, GSM3682350, GSM3682352, GSM3682361, GSM3682364, GSM3682365, GSM3682367, GSM3702302, GSM3702303, GSM3702304, GSM4256971, GSM4256972, GSM4256973, GSM4256974, GSM4256975, GSM4256976, GSM4494475, GSM4494476, GSM4494477, GSM4494478, GSM4494479, GSM4494480, GSM4494481, GSM4494482, GSM4494483, GSM4494484, GSM4494485, GSM4494486, GSM4494487, GSM4494488, GSM4494489, GSM4494490, GSM4494491, GSM4494492, GSM4494493, GSM4494494, GSM4494495, GSM4494496, GSM4494497, GSM4494498, GSM4494499, GSM4494500, GSM4494501, GSM4494502, GSM4494503, GSM4494504, GSM4494505, GSM4494506, GSM4494507, GSM4494508, GSM4494509, GSM4494510, GSM4494511, GSM4494512, GSM4494513, GSM4618330, GSM4618331, GSM4618332, GSM4618333, GSM4618334, GSM4618335, GSM4775607, GSM4775608, GSM4775609, GSM4775610, GSM4775611, GSM4775612, GSM4775613, GSM4775614, GSM4775615, GSM4775616, GSM4775617, GSM4775618, GSM4775619, GSM4775620, GSM4775621, GSM4775622, GSM4775623, GSM4775624, GSM4775625, GSM4775626, GSM4775627, GSM4775628, GSM4775629, GSM4775630, GSM4775631, GSM4775632, GSM4775633, GSM4775634, GSM4775635, GSM4775636, GSM4775637, GSM4775638, GSM4775639, GSM4775640, GSM4775641, GSM4775642, GSM4775643, GSM4775644, GSM4775645, GSM4775646, GSM4775647, GSM4775648, GSM4775649, GSM4775650, GSM4775651, GSM4775652, GSM4775653, GSM4775654, GSM4775655, GSM4775656, GSM4775657, GSM4775658, GSM4775659, GSM4775660, GSM4775661, GSM4775662, GSM4775663, GSM4775664, GSM4775665, GSM4775666, GSM4775667, GSM4775668, GSM4775669, GSM4775670, GSM4775671, GSM4775672, GSM4775673, GSM4775674, GSM4775675, GSM4775676, GSM4775677, GSM4775678, GSM4775679, GSM4775680, GSM4775681, GSM4775682, GSM4775683, GSM4775684, GSM4775685, GSM4775686, GSM4775687, GSM4775688, GSM4775689, GSM4775690, GSM4775691, GSM4775692, GSM4775693, GSM4775694, GSM4775695, GSM4775696, GSM4775697, GSM4775698, GSM4775699, GSM4775700, GSM4775701, GSM4818228, GSM4818229, GSM4818230, GSM4818231, GSM4818232, GSM4818233, GSM4818234, GSM4818235, GSM4818236, GSM4818237, GSM4818238, GSM4818239, GSM4885935, GSM4885936, GSM4885937, GSM4885938, GSM4885939, GSM4885940, GSM5060259, GSM5060260, GSM5060261, GSM5060262, GSM5060263, GSM5088611, GSM5088612, GSM5088613, GSM5088614, GSM5088615, GSM5088616, GSM5104825, GSM5104826, GSM5104827, GSM5104828, GSM5104829, GSM5104830, GSM5104831, GSM5104832, GSM5104833, GSM5104834, GSM5104835, GSM5104836, GSM5310082, GSM5310083, GSM5310084, GSM5310085, GSM5310086, GSM5310087, GSM5310088, GSM5310089, GSM6063601, GSM6063602, GSM6063603, GSM6063604, GSM6063605, GSM6063606, GSM6063607, GSM6063608, GSM6063609, GSM6252543, GSM6252544, GSM6252545, GSM6252546, GSM6252547, GSM6252548, GSM6252549, GSM6252550, GSM6252551, GSM6252552, GSM6252553, GSM6252554, GSM6252561, GSM6252562, GSM6252563, GSM6252564, GSM6252565, GSM6252566, GSM6252567, GSM6252568, GSM6252569, GSM6252570, GSM6252571, GSM6252572, GSM6252573, GSM6252574, GSM6252575, GSM6252576, GSM6252577, GSM6252578, GSM6252579, GSM6252580, GSM6252581, GSM6252582, GSM6252583, GSM6252584, GSM6252585, GSM6252586, GSM6252587, GSM6252588, GSM6252589, GSM6252590, GSM6252591, GSM6252592, GSM6252593, GSM6252594, GSM6252595, GSM6252596, GSM6252597, GSM6252598, GSM6252599, GSM6252600, GSM6252601, GSM6252602, GSM6252603, GSM6252604, GSM6252605, GSM6252606, GSM6252607, GSM6252608, GSM6252609, GSM6252610, GSM6252611, GSM6252612, GSM6252613, GSM6252614, GSM6252615, GSM6252616, GSM6252617, GSM6252618, GSM6915608, GSM6915609, GSM6915610, GSM6915611, GSM6915612, GSM6915613, GSM6915614, GSM6915615, GSM6915616, GSM7798176, GSM7798177, GSM7798178, GSM7798179, GSM7798180, GSM7798181, GSM7798182, GSM7798183, GSM7798184, GSM7798185, GSM7798189, GSM7798190, GSM7844490, GSM7844491, GSM7844492, GSM7844493, GSM7844494, GSM7844495, GSM7844496, GSM7844497, GSM7844498, GSM7844499, GSM7844500, GSM7844501, GSM7844502, GSM7844503, GSM7844504, GSM7844505, GSM7844506, GSM7844507, GSM7844508, GSM7844509, GSM7844510, GSM7844511, GSM7844512, GSM7844513, GSM7844514, GSM7844515, GSM7844516, GSM7844517, GSM7844567, GSM7844568, GSM7844569, GSM7844570, GSM7844571, GSM8005312, GSM8005313, GSM8075942, GSM8075943, GSM8075944, GSM8075945, GSM8075946, GSM8075947, GSM8075948, GSM8075949, GSM8075950, GSM8075951, GSM8075952, GSM8075953, GSM8075954, GSM8075955, GSM8075956, GSM8075957, GSM8075958, GSM8075959, GSM8075960, GSM8075961, GSM8075962, GSM8075963, GSM8075964, GSM8075965, GSM8075966, GSM8075967, GSM8075968, GSM8075969, GSM8075970, GSM8075971, GSM8075972, GSM8075973, GSM8075974, GSM8075975, GSM8075976, GSM8075977, GSM8075978, GSM8075979, GSM8075980, GSM8075981, GSM8075982, GSM8075983, GSM8075984, GSM8075985, GSM8075986, GSM8075987, GSM8075988, GSM8075989, GSM8075990, GSM8075991, GSM8075992, GSM8075993, GSM8075994, GSM8075995, GSM8075996, GSM8075997, GSM8075998, GSM8075999, GSM8076000, GSM8076001, GSM8076002, GSM8076003, GSM8076004, GSM8076005, GSM8076006, GSM8076007, GSM8076008, GSM8076009, GSM8076010, GSM8076011, GSM8076012, GSM8076013, GSM8076014, GSM8076015, GSM8076016, GSM8076017, GSM8076018, GSM8076019, GSM8076020, GSM8076021, GSM8076022, GSM8076023, GSM8076024, GSM8076025, GSM8076026, GSM8076027, GSM8122103, GSM8122104, GSM8122105, GSM8122106, GSM8122107, GSM8122108, GSM8122109, GSM8122110, GSM8217933, GSM8217934, GSM8217935, GSM8217936, GSM8244456, GSM8244457, GSM8244458, GSM8561890, GSM8561891, GSM8561892, GSM8561893, GSM8561894, GSM8561895, GSM8561896, GSM8561897
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| Series (39)
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| GSE80556 |
Alternative splicing in tomato pollen in response to heat stress |
| GSE101482 |
ATAC-seq profiling of open chromatin in the root tips of four plant species (Arabidopsis thaliana, Medicago truncatula, Solanum lycopersicum, and Oryza sativa) and two Arabidopsis thaliana cell types (root hair and non-hair epidermal cells) |
| GSE125558 |
RNA-seq on tomato infected with Xanthomonas euvesicatoria |
| GSE126372 |
Auxin response in tomato |
| GSE128680 |
Multiscale gene expression profiling of 1 cm root tips of control and submerged Oryza sativa, Medicago truncatula, Solanum lycopersicum and Solanum pennellii seedlings |
| GSE129197 |
slmp mutant in tomato leaf primordia |
| GSE143311 |
Prevalence of alternative ATG and non-ATG translation initiators and their regulatory effects across plants |
| GSE149217 |
Atlas of chromatin accessibility and translatome of tomato and rice root tip cell types |
| GSE152569 |
Heritable enhanced growth vigor through grafting is associated with the RdDM pathway in plants [Tomato_graft_RNAseq] |
| GSE152570 |
Heritable enhanced growth vigor through grafting is associated with the RdDM pathway in plants |
| GSE157831 |
Far-red enriched light delays tomato transcriptome modulations in response to Botrytis cinerea infection |
| GSE159050 |
Developmental series of tomato lateral root development |
| GSE160907 |
Translation initiation landscape of tomato-infecting virus |
| GSE166013 |
Next generation sequencing of miR6024 overexpressing tomato transgenics in control state and under Alternaria solani stress |
| GSE166929 |
Floral transition trajectories dissected by single meristem transcriptomes at high temporal resolution. |
| GSE167407 |
Transcriptome analysis of piperonylic acid-treated tomato root and shoot tissues |
| GSE174416 |
The VIL gene CRAWLING ELEPHANT controls plant maturation and differentiation in tomato via polycomb silencing |
| GSE201432 |
Transcriptome profiling after reducing source-to-sink ratio in tomato plants reveals alterations in source leaf activity |
| GSE206355 |
HSFA1a controls plant heat stress response through its action on the 3D chromatin reorganization of enhancer-promoter interactions [ATAC-seq] |
| GSE206356 |
HSFA1a controls plant heat stress response through its action on the 3D chromatin reorganization of enhancer-promoter interactions [Capture Hi-C] |
| GSE206358 |
HSFA1a controls plant heat stress response through its action on the 3D chromatin reorganization of enhancer-promoter interactions [ChIP-seq] |
| GSE206359 |
HSFA1a controls plant heat stress response through its action on the 3D chromatin reorganization of enhancer-promoter interactions [DAP-seq] |
| GSE206360 |
HSFA1a controls plant heat stress response through its action on the 3D chromatin reorganization of enhancer-promoter interactions [Hi-C] |
| GSE206361 |
HSFA1a controls plant heat stress response through its action on the 3D chromatin reorganization of enhancer-promoter interactions [HiChIP] |
| GSE206362 |
HSFA1a controls plant heat stress response through its action on the 3D chromatin reorganization of enhancer-promoter interactions [RNA-seq 1] |
| GSE206363 |
HSFA1a controls plant heat stress response through its action on the 3D chromatin reorganization of enhancer-promoter interactions [RNA-seq 2] |
| GSE206365 |
HSFA1a controls plant heat stress response through its action on the 3D chromatin reorganization of enhancer-promoter interactions. |
| GSE243908 |
THE EPIGENOME PLAYS A MAJOR ROLE IN TOMATO 3D CHROMATIN ORGANIZATION [ChIP-seq] |
| GSE243909 |
THE EPIGENOME PLAYS A MAJOR ROLE IN TOMATO 3D CHROMATIN ORGANIZATION [Hi-C] |
| GSE243910 |
THE EPIGENOME PLAYS A MAJOR ROLE IN TOMATO 3D CHROMATIN ORGANIZATION [RNA-seq] |
| GSE243911 |
THE EPIGENOME PLAYS A MAJOR ROLE IN TOMATO 3D CHROMATIN ORGANIZATION |
| GSE245525 |
KRYPTONITE shapes TAD-like boundaries through the control of H3K9ac [ChIP-seq] |
| GSE245527 |
KRYPTONITE shapes TAD-like boundaries through the control of H3K9ac [Hi-C] |
| GSE245529 |
KRYPTONITE shapes TAD-like boundaries through the control of H3K9ac |
| GSE255611 |
Tomato Shade Avoidance: Unraveling Internode Elongation and Hormonal Harmony |
| GSE260668 |
Transcriptome-wide mapping of RNA:protein interactions of GFP-RS2Z35 and GFP-RS2Z36 in tomato (Solanum lycopersicum) leaves. |
| GSE262552 |
Tomato RS2Z35 and RS2Z36 |
| GSE264429 |
KRYPTONITE shapes TAD-like boundaries through the control of H3K9ac [ATAC-Seq] |
| GSE264430 |
KRYPTONITE shapes TAD-like boundaries through the control of H3K9ac [ChIP-Seq] |
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| Supplementary data files not provided |
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