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Series GSE246350 Query DataSets for GSE246350
Status Public on Feb 14, 2024
Title Ongoing Production of Tissue-Resident Macrophages from Hematopoietic Stem Cells in Healthy Adult Macaques [RNA-seq]
Organism Macaca mulatta
Experiment type Expression profiling by high throughput sequencing
Summary To understand the ontogeny and longevity of tissue-resident macrophages in nonhuman primates (NHPs), we employ a model of autologous hematopoietic stem progenitor cell (HSPC) transplantation with HSPCs genetically modified to be marked with clonal barcodes, allowing for subsequent analysis of clonal ontogeny.
 
Overall design Macrophages from animals that had been transplanted with barcode- and GFP-labeled stem cells were compared with non-GFP macrophages and macrophages from control, unmanipulated animals.
 
Contributor(s) Rahmberg AR, Wu C, Shin T, Hong SG, Pei L, Markowitz TE, Hickman HD, Dunbar CE, Brenchley JM
Citation(s) 38048388
Submission date Oct 26, 2023
Last update date Feb 14, 2024
Contact name Jason Brenchley
E-mail(s) jbrenchl@niaid.nih.gov
Organization name NIAID
Street address 4 Center Drive
City Bethesda
State/province MD
ZIP/Postal code 20892
Country USA
 
Platforms (1)
GPL27943 Illumina NovaSeq 6000 (Macaca mulatta)
Samples (4)
GSM7867551 ZJ31_GFPneg_1
GSM7867552 ZJ31_GFPpos_2
GSM7867553 DBv1_Ctrl_3
This SubSeries is part of SuperSeries:
GSE246351 Ongoing Production of Tissue-Resident Macrophages from Hematopoietic Stem Cells in Healthy Adult Macaques
Relations
BioProject PRJNA1032592

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE246350_RSEM.genes.FPKM.all_samples.txt.gz 358.9 Kb (ftp)(http) TXT
GSE246350_RSEM_genes_expected_counts.tsv.gz 396.2 Kb (ftp)(http) TSV
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Raw data are available in SRA

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