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Series GSE248561 Query DataSets for GSE248561
Status Public on Dec 08, 2023
Title RNA-seq experiment of wild-type (WT) and sr34a-1 mutant germinated seeds grown for 44 hours and exposed or not to ABA for 2 hours.
Organism Arabidopsis thaliana
Experiment type Expression profiling by high throughput sequencing
Summary Transcriptome profiles of wild-type (WT) and sr34a-1 mutant seeds germinated for 44 hours in continuous light and transferred to a control or ABA-containing medium during 2 hours.
Overall design To investigate the function of SR34a in regulating gene expression and alternative splicing during Arabidopsis seedling establishment and ABA responses, we compared the transcriptomes of WT Col-0 and sr34a-1 mutant germinated seeds under control and in the presence of ABA
Contributor(s) Laloum T, Martín G, Duque P
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Submission date Nov 24, 2023
Last update date Dec 08, 2023
Contact name Tom Laloum
Phone 918995207
Organization name Instituto Gulbenkian de Ciencia
Lab Plant Molecular Biology
Street address Rua da Quinta Grande, 6
City Oeiras
ZIP/Postal code 2780-156
Country Portugal
Platforms (1)
GPL26208 Illumina NovaSeq 6000 (Arabidopsis thaliana)
Samples (12)
GSM7916792 WT germinated seeds submitted to mock treatment biol rep 1
GSM7916793 WT germinated seeds submitted to mock treatment biol rep 2
GSM7916794 WT germinated seeds submitted to mock treatment biol rep 3
This SubSeries is part of SuperSeries:
GSE248563 sr34a-1 mutant germinated seeds and exposure to ABA
BioProject PRJNA1044786

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE248561_INCLUSION_LEVELS_FULL-araTha10.txt.gz 45.0 Mb (ftp)(http) TXT 1.3 Mb (ftp)(http) TXT
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