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Series GSE25247 Query DataSets for GSE25247
Status Public on Nov 11, 2010
Title BI Human Reference Epigenome Mapping Project: Characterization of DNA methylation by RRBS in human subject
Project Roadmap Epigenomics
Organism Homo sapiens
Experiment type Methylation profiling by high throughput sequencing
Summary Characterization of the reference epigenome in humans in a diverse panel of ES cells, tissue stem cells, reprogrammed stem cells, primary cells and tissues

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For data usage terms and conditions, please refer to:
http://www.drugabuse.gov/funding/funding-opportunities/nih-common-fund/epigenomics-data-access-policies
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Overall design BI Human Reference Epigenome Mapping Project - samples and experiments will continue to be added to this study over the course of the project.

EDACC Genboree Page:
http://genboree.org/java-bin/project.jsp?projectName=XML%20Submissions%2FBroad%2FSTUDY%2FEDACC.2296
Web link http://www.ncbi.nlm.nih.gov/geo/roadmap/epigenomics/
 
Contributor(s) Bernstein BE, Meissner A
Citation(s) 20944595
BioProject PRJNA34535
Submission date Nov 09, 2010
Last update date May 15, 2019
Contact name BROAD INSTITUTE
E-mail(s) rharris1@bcm.tmc.edu
Organization name Broad Institute
Street address -
City Cambridge
State/province MA
ZIP/Postal code 02142
Country USA
 
Platforms (2)
GPL9115 Illumina Genome Analyzer II (Homo sapiens)
GPL10999 Illumina Genome Analyzer IIx (Homo sapiens)
Samples (55)
GSM621552 Bisulfite-Seq analysis of RRBS353 derived from human hiPS-20b cells; 30GRUAAXX090604-2-S
GSM621557 Bisulfite-Seq analysis of RRBS522 derived from human hiPS-15b cells; 42TY1AAXX100126-3-S
GSM621559 Bisulfite-Seq analysis of RRBS533 derived from human CD34 cells; 42U16AAXX100205-7-S
Relations
SRA SRP004244

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE25247_RAW.tar 490.0 Mb (http)(custom) TAR (of WIG)
SRA Run SelectorHelp
Raw data not provided for this record
Processed data provided as supplementary file
Raw data are available in SRA
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