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Series GSE252616 Query DataSets for GSE252616
Status Public on Apr 17, 2024
Title SOCS2 contributes to reduction of the third digit during development of the chicken forelimb
Organism Gallus gallus
Experiment type Expression profiling by high throughput sequencing
Summary We used the RCAS avian retrovirus to overexpress SOCS2 in the developing chicken limb buds and transcriptome sequencing (mRNA-Seq) revealed changes in expression of genes known to be associated with growth and development in forelimbs with overexpressed SOCS2.
 
Overall design mRNA-seq data of injected right wing and uninjected (control) left wing of one chick embryo after SOCS2 overexpression were obtained by Illumina NovaSeq 6000.
 
Contributor(s) Li X, Li S, Bai S, Wang Z
Citation(s) 38564834
Submission date Jan 05, 2024
Last update date Apr 17, 2024
Contact name Xiaoping Li
E-mail(s) lixiaoping94@outlook.com
Organization name Shenyang Agricultural University
Street address 120 Dongling Rd.
City Shenyang
ZIP/Postal code 110866
Country China
 
Platforms (1)
GPL26853 Illumina NovaSeq 6000 (Gallus gallus)
Samples (2)
GSM8004013 SC2_R, RCAS-GFP-SOCS2 injected
GSM8004014 SC2_C, RCAS-GFP-SOCS2 uninjected
Relations
BioProject PRJNA1061522

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE252616_Socs2_Raw_counts.txt.gz 284.5 Kb (ftp)(http) TXT
GSE252616_Socs2_TPM_Normalized_counts.txt.gz 331.5 Kb (ftp)(http) TXT
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Raw data are available in SRA

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