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Series GSE25561 Query DataSets for GSE25561
Status Public on Nov 24, 2010
Title Role of chaperones and a cytoplasmatic protease in recombinant protein production in E. coli at suboptimal growth temperature
Organism Escherichia coli
Experiment type Expression profiling by array
Summary Recent studies have revealed that at lower cultivation temperatures (25°C) much higher percentage of correctly folded recombinant proteins can be extracted from inclusion bodies. The goal of our research was to investigate mechanisms determining characteristics of non-classical inclusion bodies production using gene expression profiling. Two strains of recombinant E. coli [BL21 (DE3)] grown at three different temperatures (25°C, 37°C and 42°C) were included in experiment.
 
Overall design Gene expression was studied in two recombinant strains (production and control strain), grown at three different temperatures (25, 37 and 42 oC) in three biological replicates. Cells were harvesed at OD=4, except for the cells grown at 25 oC, here they were harvested at OD=4 and OD=10.
 
Contributor(s) Mahnič M, Baebler S, Blejec A
Citation(s) 24061173
Submission date Nov 23, 2010
Last update date Nov 07, 2014
Contact name Spela Baebler
E-mail(s) spela.baebler@nib.si
Organization name National Institute of Biology
Department Department of Biotechnology and Systems Biology
Street address Vecna pot 111
City Ljubljana
ZIP/Postal code 1000
Country Slovenia
 
Platforms (1)
GPL11242 E.coli_12k_Combimatrix
Samples (23)
GSM628228 BL21_25_4_1
GSM628229 BL21_25_4_2
GSM628230 BL21_25_4_3
Relations
BioProject PRJNA134285

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE25561_RAW.tar 3.6 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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