NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE256558 Query DataSets for GSE256558
Status Public on Feb 27, 2024
Title TF ChIP-seq from whole organism (ENCSR005MLL)
Project modENCODE
Organism Drosophila melanogaster
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary ChIP-seq on transgenic flies expressing Pdp1-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf
 
Overall design https://www.encodeproject.org/ENCSR005MLL/
 
Citation(s) 22955616
BioProject PRJNA63463
Submission date Feb 24, 2024
Last update date Sep 25, 2024
Contact name ENCODE DCC
E-mail(s) encode-help@lists.stanford.edu
Organization name ENCODE DCC
Street address 300 Pasteur Dr
City Stanford
State/province CA
ZIP/Postal code 94305-5120
Country USA
 
Platforms (1)
GPL13304 Illumina HiSeq 2000 (Drosophila melanogaster)
Samples (3)
GSM8106146 TF ChIP-seq from whole organism (ENCLB849KLH)
GSM8106147 TF ChIP-seq from whole organism (ENCLB305OSD)
GSM8106148 TF ChIP-seq from whole organism (ENCLB654KVN)
Relations
Reanalyzed by GSE278063

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE256558_ENCFF046YYK_optimal_IDR_thresholded_peaks_dm3.bigBed 184.5 Kb (ftp)(http) BIGBED
GSE256558_ENCFF134BIZ_read-depth_normalized_signal_dm6.bigWig 16.9 Mb (ftp)(http) BIGWIG
GSE256558_ENCFF166UHW_peaks_and_background_as_input_for_IDR_dm3.bed.gz 619.6 Kb (ftp)(http) BED
GSE256558_ENCFF177MKD_optimal_IDR_thresholded_peaks_dm3.bed.gz 85.7 Kb (ftp)(http) BED
GSE256558_ENCFF249WVI_read-depth_normalized_signal_dm3.bigWig 14.9 Mb (ftp)(http) BIGWIG
GSE256558_ENCFF282SGF_peaks_and_background_as_input_for_IDR_dm6.bigBed 1.2 Mb (ftp)(http) BIGBED
GSE256558_ENCFF364PMC_signal_of_unique_reads_dm3.bigWig 14.9 Mb (ftp)(http) BIGWIG
GSE256558_ENCFF449TMK_peaks_and_background_as_input_for_IDR_dm6.bed.gz 693.9 Kb (ftp)(http) BED
GSE256558_ENCFF522VOW_control_normalized_signal_dm3.bigWig 15.4 Mb (ftp)(http) BIGWIG
GSE256558_ENCFF638MQP_signal_of_unique_reads_dm6.bigWig 16.9 Mb (ftp)(http) BIGWIG
GSE256558_ENCFF679MZC_optimal_IDR_thresholded_peaks_dm6.bigBed 187.7 Kb (ftp)(http) BIGBED
GSE256558_ENCFF761QGZ_peaks_and_background_as_input_for_IDR_dm3.bigBed 1.1 Mb (ftp)(http) BIGBED
GSE256558_ENCFF791HUU_control_normalized_signal_dm6.bigWig 16.6 Mb (ftp)(http) BIGWIG
GSE256558_ENCFF816HWP_optimal_IDR_thresholded_peaks_dm6.bed.gz 88.1 Kb (ftp)(http) BED
GSE256558_RAW.tar 294.1 Mb (http)(custom) TAR (of BED, BIGBED, BIGWIG, TXT)
Raw data are available in SRA

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap