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Series GSE256567

Query DataSets for GSE256567

Status

Public on Feb 27, 2024

Title

TF ChIP-seq from whole organism (ENCSR187IVR)

Project

modENCODE

Organism

Drosophila melanogaster

Experiment type

Genome binding/occupancy profiling by high throughput sequencing

Summary

ChIP-seq on transgenic flies expressing CG14711-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf

Overall design

https://www.encodeproject.org/ENCSR187IVR/

Citation(s)

22955616

BioProject

PRJNA63463

Submission date

Feb 24, 2024

Last update date

Sep 25, 2024

Contact name

ENCODE DCC

E-mail(s)

encode-help@lists.stanford.edu

Organization name

ENCODE DCC

Street address

300 Pasteur Dr

City

Stanford

State/province

ZIP/Postal code

94305-5120

Country

USA

Platforms (1)

GPL21306

Illumina HiSeq 4000 (Drosophila melanogaster)

Samples (2)

GSM8106165	TF ChIP-seq from whole organism (ENCLB048WMM)
GSM8106166	TF ChIP-seq from whole organism (ENCLB255NLV)

Relations

Reanalyzed by

GSE278063

Download family	Format
SOFT formatted family file(s)	SOFT
MINiML formatted family file(s)	MINiML
Series Matrix File(s)	TXT

Supplementary file	Size	Download	File type/resource
GSE256567_ENCFF141APK_optimal_IDR_thresholded_peaks_dm6.bigBed	275.8 Kb	(ftp)(http)	BIGBED
GSE256567_ENCFF469KWZ_peaks_dm6.bigBed	1.2 Mb	(ftp)(http)	BIGBED
GSE256567_ENCFF570MSP_signal_of_unique_reads_dm6.bigWig	16.8 Mb	(ftp)(http)	BIGWIG
GSE256567_ENCFF675OTQ_optimal_IDR_thresholded_peaks_dm6.bed.gz	112.9 Kb	(ftp)(http)	BED
GSE256567_ENCFF786EHC_read-depth_normalized_signal_dm6.bigWig	16.8 Mb	(ftp)(http)	BIGWIG
GSE256567_ENCFF892TXQ_peaks_dm6.bed.gz	743.1 Kb	(ftp)(http)	BED
GSE256567_ENCFF962UGG_control_normalized_signal_dm6.bigWig	13.2 Mb	(ftp)(http)	BIGWIG
GSE256567_RAW.tar	96.7 Mb	(http)(custom)	TAR (of BED, BIGBED, BIGWIG, TXT)
Raw data are available in SRA