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Series GSE256578

Query DataSets for GSE256578

Status

Public on Feb 27, 2024

Title

TF ChIP-seq from whole organism (ENCSR189NRY)

Project

modENCODE

Organism

Drosophila melanogaster

Experiment type

Genome binding/occupancy profiling by high throughput sequencing

Summary

ChIP-seq on transgenic flies expressing Hsf-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf

Overall design

https://www.encodeproject.org/ENCSR189NRY/

Citation(s)

22955616

BioProject

PRJNA63463

Submission date

Feb 24, 2024

Last update date

Feb 27, 2024

Contact name

ENCODE DCC

E-mail(s)

encode-help@lists.stanford.edu

Organization name

ENCODE DCC

Street address

300 Pasteur Dr

City

Stanford

State/province

ZIP/Postal code

94305-5120

Country

USA

Platforms (1)

GPL13304

Illumina HiSeq 2000 (Drosophila melanogaster)

Samples (3)

GSM8106181	TF ChIP-seq from whole organism (ENCLB576EZM)
GSM8106182	TF ChIP-seq from whole organism (ENCLB529LGA)
GSM8106183	TF ChIP-seq from whole organism (ENCLB524ELW)

Download family	Format
SOFT formatted family file(s)	SOFT
MINiML formatted family file(s)	MINiML
Series Matrix File(s)	TXT

Supplementary file	Size	Download	File type/resource
GSE256578_ENCFF133ZBO_read-depth_normalized_signal_dm6.bigWig	16.9 Mb	(ftp)(http)	BIGWIG
GSE256578_ENCFF216LVM_read-depth_normalized_signal_dm3.bigWig	14.9 Mb	(ftp)(http)	BIGWIG
GSE256578_ENCFF276FUD_control_normalized_signal_dm6.bigWig	16.6 Mb	(ftp)(http)	BIGWIG
GSE256578_ENCFF293DSG_peaks_and_background_as_input_for_IDR_dm3.bed.gz	700.4 Kb	(ftp)(http)	BED
GSE256578_ENCFF338VQN_peaks_and_background_as_input_for_IDR_dm6.bed.gz	741.4 Kb	(ftp)(http)	BED
GSE256578_ENCFF531YVL_optimal_IDR_thresholded_peaks_dm6.bed.gz	109.8 Kb	(ftp)(http)	BED
GSE256578_ENCFF686DZI_signal_of_unique_reads_dm6.bigWig	16.9 Mb	(ftp)(http)	BIGWIG
GSE256578_ENCFF686UBL_optimal_IDR_thresholded_peaks_dm3.bed.gz	100.4 Kb	(ftp)(http)	BED
GSE256578_ENCFF695DFH_peaks_and_background_as_input_for_IDR_dm6.bigBed	1.2 Mb	(ftp)(http)	BIGBED
GSE256578_ENCFF763BTX_control_normalized_signal_dm3.bigWig	15.3 Mb	(ftp)(http)	BIGWIG
GSE256578_ENCFF793MPU_optimal_IDR_thresholded_peaks_dm6.bigBed	216.2 Kb	(ftp)(http)	BIGBED
GSE256578_ENCFF801FST_optimal_IDR_thresholded_peaks_dm3.bigBed	204.6 Kb	(ftp)(http)	BIGBED
GSE256578_ENCFF802RNS_signal_of_unique_reads_dm3.bigWig	14.8 Mb	(ftp)(http)	BIGWIG
GSE256578_ENCFF977CKR_peaks_and_background_as_input_for_IDR_dm3.bigBed	1.2 Mb	(ftp)(http)	BIGBED
GSE256578_RAW.tar	293.6 Mb	(http)(custom)	TAR (of BED, BIGBED, BIGWIG, TXT)
Raw data are available in SRA