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Series GSE256592 Query DataSets for GSE256592
Status Public on Feb 27, 2024
Title TF ChIP-seq from whole organism (ENCSR007HUT)
Project modENCODE
Organism Drosophila melanogaster
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary ChIP-seq on transgenic flies expressing cyc-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf
 
Overall design https://www.encodeproject.org/ENCSR007HUT/
 
Citation(s) 22955616
BioProject PRJNA63463
Submission date Feb 24, 2024
Last update date Sep 25, 2024
Contact name ENCODE DCC
E-mail(s) encode-help@lists.stanford.edu
Organization name ENCODE DCC
Street address 300 Pasteur Dr
City Stanford
State/province CA
ZIP/Postal code 94305-5120
Country USA
 
Platforms (1)
GPL13304 Illumina HiSeq 2000 (Drosophila melanogaster)
Samples (3)
GSM8106206 TF ChIP-seq from whole organism (ENCLB979HBE)
GSM8106207 TF ChIP-seq from whole organism (ENCLB925OFY)
GSM8106208 TF ChIP-seq from whole organism (ENCLB350NOE)
Relations
Reanalyzed by GSE278063

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE256592_ENCFF044MOY_read-depth_normalized_signal_dm3.bigWig 14.7 Mb (ftp)(http) BIGWIG
GSE256592_ENCFF082KKV_control_normalized_signal_dm6.bigWig 16.5 Mb (ftp)(http) BIGWIG
GSE256592_ENCFF099WME_control_normalized_signal_dm3.bigWig 15.2 Mb (ftp)(http) BIGWIG
GSE256592_ENCFF156HKU_signal_of_unique_reads_dm3.bigWig 14.7 Mb (ftp)(http) BIGWIG
GSE256592_ENCFF169FML_optimal_IDR_thresholded_peaks_dm3.bed.gz 139.0 Kb (ftp)(http) BED
GSE256592_ENCFF198JRV_peaks_and_background_as_input_for_IDR_dm3.bed.gz 688.6 Kb (ftp)(http) BED
GSE256592_ENCFF274AFL_optimal_IDR_thresholded_peaks_dm6.bigBed 316.0 Kb (ftp)(http) BIGBED
GSE256592_ENCFF335QKY_peaks_and_background_as_input_for_IDR_dm3.bigBed 1.2 Mb (ftp)(http) BIGBED
GSE256592_ENCFF375ZRE_optimal_IDR_thresholded_peaks_dm3.bigBed 315.1 Kb (ftp)(http) BIGBED
GSE256592_ENCFF609OTX_peaks_and_background_as_input_for_IDR_dm6.bigBed 1.2 Mb (ftp)(http) BIGBED
GSE256592_ENCFF663EFI_signal_of_unique_reads_dm6.bigWig 16.8 Mb (ftp)(http) BIGWIG
GSE256592_ENCFF710XKN_optimal_IDR_thresholded_peaks_dm6.bed.gz 139.8 Kb (ftp)(http) BED
GSE256592_ENCFF728GMB_peaks_and_background_as_input_for_IDR_dm6.bed.gz 724.2 Kb (ftp)(http) BED
GSE256592_ENCFF911KPV_read-depth_normalized_signal_dm6.bigWig 16.8 Mb (ftp)(http) BIGWIG
GSE256592_RAW.tar 291.2 Mb (http)(custom) TAR (of BED, BIGBED, BIGWIG, TXT)
Raw data are available in SRA

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