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GEO help: Mouse over screen elements for information. |
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| Status |
Public on Feb 09, 2012 |
| Title |
Identification of target genes of cancer-related microRNAs in human cancer |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by array
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| Summary |
To identify target genes of oncogenic or tumor suppressive microRNAs in human cancer, several cell lines (bladder cancer, prostate cancer, renal cell carcinoma. lung squamous cell carcinoma and head and neck squamous cell carcinoma) were subject to Agilent whole genome microarray.
miR-183 and miR-96 function as oncogene. miR-1, miR-133a, miR-135a, miR-145 and miR-375 function as tumor suppressor
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| Overall design |
The miRNA transfected human cancer cell lines (KK47, T24, A498, PC3, DU145, FaDu, SAS, PC10 and H157) were compared to control cell lines.
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| Contributor(s) |
Seki N |
| Citation(s) |
21701775, 21753766 |
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| Submission date |
Dec 13, 2010 |
| Last update date |
Jun 30, 2017 |
| Contact name |
Naohiko Seki |
| E-mail(s) |
naoseki@faculty.chiba-u.jp
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| Phone |
81-43-226-2971
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| Fax |
81-43-227-3442
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| Organization name |
Chiba University
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| Department |
School of Medicine
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| Lab |
Functional Genomics
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| Street address |
1-8-1 Inohana,Chuo-ku
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| City |
Chiba |
| State/province |
Chiba |
| ZIP/Postal code |
260-8670 |
| Country |
Japan |
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| Platforms (1) |
| GPL10332 |
Agilent-026652 Whole Human Genome Microarray 4x44K v2 (Feature Number version) |
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| Samples (16)
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| GSM639289 |
Identification of miR-96 target genes in bladder cancer (KK47) |
| GSM639290 |
Identification of miR-183 target genes in bladder cancer (KK47) |
| GSM639291 |
Identification of miR-96 target genes in bladder cancer (T24) |
| GSM639292 |
Identification of miR-183 target genes in bladder cancer (T24) |
| GSM639293 |
Identification of miR-133a target genes in lung cancer (H157) |
| GSM639294 |
Identification of miR-133a target genes in lung cancer (P10) |
| GSM639295 |
Identification of miR-133a target genes in renal cell carcinoma (A498) |
| GSM639296 |
Identification of miR-135a target genes in renal cell carcinoma (A498) |
| GSM639297 |
Identification of miR-1 target genes in HNSCC (IMC3) |
| GSM639298 |
Identification of miR-133a target genes in HNSCC (IMC3) |
| GSM639299 |
Identification of miR-375 target genes in HNSCC (SAS) |
| GSM639300 |
Identification of miR-375 target genes in HNSCC (FaDu) |
| GSM639301 |
Identification of miR-1 target genes in prostate cancer (DU145) |
| GSM639302 |
Identification of miR-133a target genes in prostate cancer (DU145) |
| GSM639303 |
Identification of miR-1 target genes in prostate cancer (PC3) |
| GSM639304 |
Identification of miR-133a target genes in prostate cancer (PC3) |
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| Relations |
| BioProject |
PRJNA135499 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE26032_RAW.tar |
252.6 Mb |
(http)(custom) |
TAR (of TXT) |
| Processed data included within Sample table |
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