NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE26079 Query DataSets for GSE26079
Status Public on Dec 15, 2010
Title Genome-wide analysis gene expression in SUM-149 cells expressing AREG shRNA
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Results of knocking-down AREG expression in SUM-149 cells by lenitviral infection of shRNA vectors and measuring gene expression provides information as to what genes are regulated by AERG in inflammatory breast cancer cells.
 
Overall design SUM-149 cells were infected with a single AREG shRNA virus (sh4) or three AREG shRNA viruses (shPld) and the non-silencing vector (shNS). Total RNA was collected and genome-wide analysis of expression was performed on RNA from each cell line.
 
Contributor(s) Baillo A, Ethier SP
Citation(s) 21302279
Submission date Dec 15, 2010
Last update date Aug 16, 2018
Contact name Andrea Baillo
E-mail(s) andreabaillo@gmail.com
Organization name Wayne State University
Street address 4100 John R
City Detroit
ZIP/Postal code 48224
Country USA
 
Platforms (1)
GPL6947 Illumina HumanHT-12 V3.0 expression beadchip
Samples (12)
GSM640332 SUM-149_rep1
GSM640333 SUM-149sh4_rep1
GSM640334 SUM-149shPld_rep1
Relations
BioProject PRJNA135213

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE26079_QNandAveraged.txt.gz 1.5 Mb (ftp)(http) TXT
GSE26079_RAW.tar 6.2 Mb (http)(custom) TAR
GSE26079_non-normalized_data.txt.gz 1.4 Mb (ftp)(http) TXT
Processed data included within Sample table
Processed data are available on Series record

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap