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Series GSE272670 Query DataSets for GSE272670
Status Public on Jul 19, 2024
Title The transcriptional dynamics of Ophryocystis elektroscirrha across its host's metamorphosis
Organism Danaus plexippus
Experiment type Expression profiling by high throughput sequencing
Summary The objective of this study was to quantify patterns of transcriptional differentiation that Ophryocystis elektroscirrha undergoes throughtout its host's metamorphosis.
 
Overall design We sequenced mRNA of homogenized monarch butterflies that we infected with Ophryocystis elektroscirrha. We sequenced two larval stages (third instar and 5th instar), two pupal time points (1 day after pupaitona and 6-8 days after pupation), and adults approximately 3-6 hours after they eclosed.
 
Contributor(s) DuBose JG, de Roode JC
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Submission date Jul 19, 2024
Last update date Jul 20, 2024
Contact name James Gabriel Amor DuBose
E-mail(s) gabe.dubose.sci@gmail.com
Organization name Emory Univeristy
Department Biology
Lab de Roode
Street address 1510 East Clifton Road Northeast 2006
City Atlanta
State/province Georgia
ZIP/Postal code 30322
Country USA
 
Platforms (1)
GPL34095 Illumina NovaSeq 6000 (Danaus plexippus)
Samples (46)
GSM8408915 mtstp3ci10_third-instar
GSM8408916 mtstp3ci11_third-instar
GSM8408917 mtstp3ci12_third-instar
Relations
BioProject PRJNA1137938

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE272670_RAW.tar 12.5 Mb (http)(custom) TAR (of TSV)
SRA Run SelectorHelp
Raw data are available in SRA

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