|
| Status |
Public on Jul 19, 2024 |
| Title |
mtstpEii122_early-pupa |
| Sample type |
SRA |
| |
|
| Source name |
whole body homogenate
|
| Organism |
Danaus plexippus |
| Characteristics |
tissue: whole body homogenate
treatment: incarnata
|
| Extracted molecule |
polyA RNA |
| Extraction protocol |
Promega SV Total Isolation System
Poly-A tail selection
|
| |
|
| Library strategy |
RNA-Seq |
| Library source |
transcriptomic |
| Library selection |
cDNA |
| Instrument model |
Illumina NovaSeq 6000 |
| |
|
| Data processing |
Transcript abundances were quantified using kallisto v.0.46.2.
Assembly: D. plexippus (Dpv3) and O. elektroscirrha (GCA_030141585.1)
Supplementary files format and content: Each processd data file is formatted as the standard kallito output.
|
| |
|
| Submission date |
Jul 19, 2024 |
| Last update date |
Jul 19, 2024 |
| Contact name |
James Gabriel Amor DuBose |
| E-mail(s) |
gabe.dubose.sci@gmail.com
|
| Organization name |
Emory Univeristy
|
| Department |
Biology
|
| Lab |
de Roode
|
| Street address |
1510 East Clifton Road Northeast 2006
|
| City |
Atlanta |
| State/province |
Georgia |
| ZIP/Postal code |
30322 |
| Country |
USA |
| |
|
| Platform ID |
GPL34095 |
| Series (1) |
| GSE272670 |
The transcriptional dynamics of Ophryocystis elektroscirrha across its host's metamorphosis |
|
| Relations |
| BioSample |
SAMN42652130 |
| SRA |
SRX25389044 |
