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Series GSE28262 Query DataSets for GSE28262
Status Public on Jun 01, 2011
Title CC chemokine ligand 2 and LIF cooperatively promote pluripotency in mouse induced pluripotent cells
Organism Mus musculus
Experiment type Expression profiling by array
Summary The pluripotency of mouse embryonic stem cells (ESC) and induced-pluripotent stem cells (iPSC) can be maintained by feeder cells, which secrete Leukemia Inhibitory Factor (LIF). We found that feeder cells provide a relatively low concentration (25 unit/ml) of LIF, which is insufficient to maintain the ESC/iPSC pluripotency in feeder free conditions. In order to identify additional factors involved in the maintenance of pluripotency, we carried out a global transcript expression profiling of mouse iPSC cultured on feeder cells and in feeder-free (LIF-treated) conditions. This identified 17 significantly differentially expressed genes (adjusted p-value<0.05) including 7 chemokines over-expressed in iPSC grown on feeder cells. Ectopic expression of these chemokines in iPSC revealed that CC chemokine ligand 2 (Ccl2) induced the key transcription factor genes for pluripotency, Klf4, Nanog, Sox2 and Tbx3. Further, addition of recombinant Ccl2 protein drastically increased the number of Nanog-GFP-positive iPSC grown in low LIF feeder free conditions. Interestingly, this effect was not observed in the absence of LIF. We further revealed that pluripotency promotion by Ccl2 is mediated by activating the Stat3-pathway followed by Klf4 up-regulation. We demonstrated that Ccl2 mediated increased pluripotency is independent of PI3K and MAPK pathways and that Tbx3 may be directly up-regulated by Klf4. Overall, Ccl2 cooperatively activates the Stat3-pathway with LIF in feeder free condition to maintain pluripotency for ESC/iPSC.
 
Overall design Total RNAs were purified from feeder cells (as a reference sample), iPSC grown on feeder cells and iPSC grown in feeder-free condition in triplicates and applied to the arrays. iPSC grown on feeder cells were separated mechanically from the feeder layer to minimize feeder cell contamination.
 
Contributor(s) Hasegawa Y
Citation(s) 21681859
Submission date Mar 30, 2011
Last update date Jan 18, 2013
Contact name Yuki Hasegawa
E-mail(s) hasegawa@gsc.riken.jp
Phone +81-45-503-9222
Fax +81-45-503-9216
Organization name RIKEN
Department OSC
Lab LSA technology development unit
Street address 1-7-22
City Suehiro-cho, Tsurumi-ku
State/province Yokohama-city
ZIP/Postal code 230-0045
Country Japan
 
Platforms (1)
GPL6105 Illumina mouse-6 v1.1 expression beadchip
Samples (11)
GSM699595 Feeder cells (MSTO) rep1
GSM699596 Feeder cells (MSTO) rep2
GSM699597 iPSC cultured with feeder free condition rep1
Relations
BioProject PRJNA139791

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE28262_RAW.tar 5.2 Mb (http)(custom) TAR
GSE28262_non-normalized.txt.gz 2.7 Mb (ftp)(http) TXT
Processed data included within Sample table

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