NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE29825 Query DataSets for GSE29825
Status Public on Jan 31, 2016
Title Expression analysis of INA6 cells after IL-6 withdrawal using MAT
Organism Homo sapiens
Experiment type Expression profiling by genome tiling array
Summary Whole transcriptome expression analysis of INA6 cells on Affymetrix Human Tiling 1.0 array set. IL-6 has been withdrawn for 13 hours which initiates apoptosis. Expression data were processed with MAT (Johnson et al., "Model-based analysis of tiling-arrays for ChIP-chip." Proc Natl Acad Sci USA, 103:12457-62, 2006.).
 
Overall design We analyzed one Affymetrix Human Tiling 1.0R set
 
Contributor(s) Reiche K, Kretzschmar A, Horn F, Hackerm├╝ller J, Engeland K
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Jun 08, 2011
Last update date Jan 31, 2016
Contact name Kristin Reiche
E-mail(s) kristin.reiche@izi.fraunhofer.de
Organization name Fraunhofer Institute for Cell Therapy and Immunology
Department Diagnostics
Street address Perlickstr. 1
City Leipzig
ZIP/Postal code 04103
Country Germany
 
Platforms (14)
GPL6156 [Hs35b_M01R] Affymetrix Human Tiling 1.0R Set, Array 1
GPL6157 [Hs35b_M02R] Affymetrix Human Tiling 1.0R Set, Array 2
GPL6158 [Hs35b_M03R] Affymetrix Human Tiling 1.0R Set, Array 3
Samples (14)
GSM739096 INA6 cells using MAT (IL-6 withdrawal) ChipA
GSM739097 INA6 cells using MAT (IL-6 withdrawal) ChipB
GSM739098 INA6 cells using MAT (IL-6 withdrawal) ChipC
This SubSeries is part of SuperSeries:
GSE29826 Differential expression analysis of INA6 cells using MAT
Relations
BioProject PRJNA155313

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE29825_INA6_13_high_p1e-5.bed.gz 383.9 Kb (ftp)(http) BED
GSE29825_RAW.tar 289.3 Mb (http)(custom) TAR (of CEL)
Processed data are available on Series record

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap