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Platform GPL6160 Query DataSets for GPL6160
Status Public on Nov 20, 2007
Title [Hs35b_M05R] Affymetrix Human Tiling 1.0R Set, Array 5
Technology type in situ oligonucleotide
Distribution commercial
Organism Homo sapiens
Manufacturer Affymetrix
Manufacture protocol See manufacturer's web site
Catalog number 900774
 
Description Tiling array submissions are typically submitted to GEO using the GEOarchive method described at http://www.ncbi.nlm.nih.gov/projects/geo/info/geo_affy.html

The GeneChip® Human Tiling 1.0R Array Set is designed for transcript mapping experiments. This 14-array set contains approximately 45 million oligonucleotide probes to interrogate the human genome. Each array in the set contains over 3.25 million Perfect Match/Mismatch probe pairs to specifically interrogate genomic regions.

Sequences used in the design of the Human Tiling 1.0R Array Set were selected from NCBI human genome assembly (Build 34). Repetitive elements were removed by RepeatMasker. Probes are tiled at an average resolution of 35 bp, as measured from the central position of adjacent 25-mer oligos, leaving a gap of approximately 10 bp between probes.

BPMAP and other files can be downloaded from the Affymetrix Web site below.
 
Web link http://www.affymetrix.com/products/arrays/specific/human_tiling.affx
http://www.affymetrix.com/support/technical/libraryfileupdatesmain.affx
Submission date Nov 20, 2007
Last update date Feb 25, 2013
Organization Affymetrix, Inc.
E-mail(s) geo@ncbi.nlm.nih.gov, support@affymetrix.com
Phone 888-362-2447
URL http://www.affymetrix.com/index.affx
Street address
City Santa Clara
State/province CA
ZIP/Postal code 95051
Country USA
 
Samples (57) GSM244077, GSM460317, GSM460331, GSM460345, GSM460359, GSM460373 
Series (50)
GSE9655 Whole-genome tiling array analysis in normal human bronchial/tracheal epithelial cells (NHBE)
GSE18490 Whole genome transcriptional profile of human tissues and cells
GSE18676 Whole genome expression in human tissues

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp

Supplementary data files not provided
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