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Series GSE30439 Query DataSets for GSE30439
Status Public on Aug 01, 2011
Title Exposure of cystic fibrosis bronchial epithelial cells (CFBE 41 o-) to Pseudomonas aeruginosa (PA01) biofilms
Organism Homo sapiens
Experiment type Expression profiling by array
Summary In the clinical setting, mutations in the CFTR gene enhance the inflammatory response to P. aeruginosa (PA01) infection, but measurements of the inflammatory response to pathogen stimulation by isolated airway epithelia can yield variable results. In this series, we exposed CFBE41o- cells over-expressing ∆F508/∆F508 CFTR and CFBE41o- cells rescued with wt-CFTR to P. aeruginosa biofilms. P. aeruginosa elicited a more robust increase in cytokine and chemokine expression (e.g., IL-8, CXCL2, CXCL3, CXCR4 and TNF-α) in CFBE-wt-CFTR cells compared to CFBE-∆F508-CFTR cells. These results demonstrate that CFBE41o- cells complemented with wt-CFTR mount a more robust inflammatory response to P. aeruginosa than CFBE41o- ∆F508/∆F508-CFTR cells.
 
Overall design CFBE41o- cells generously provided by Dr. J.P. Clancy (University of Alabama). The series involved 4 treatment groups: unexposed wild type CFTR cells, unexposed ∆F508/∆F508 CFTR cells, wild type CFTR cells exposed to PA01, and ∆F508/∆F508 CFTR cells exposed to PA01. Each treatment group involved 4 replicate polarized monolayers. PAO1 was added to the apical side of exposed monolayers at a multiplicity of infection (MOI) of 30:1 for 1 hour in the absence of antibiotics, and then planktonic PAO1 was removed by replacing the apical medium with MEM supplemented with 0.4% arginine (2). Control monolayers were treated identically except that vehicle only (medium used to grow PAO1, MEM supplemented with 0.4% arginine) was added to the apical side of cells. Five hours after washing planktonic P. aeruginosa from the cell monolayers mRNA was isolated.
 
Contributor(s) Hampton TH
Citation(s) 22821996
Submission date Jul 06, 2011
Last update date Mar 25, 2019
Contact name Thomas H Hampton
E-mail(s) Thomas.Hampton@Dartmouth.edu
Phone 603 650-1184
URL http://www.dartmouth.edu/~toxmetal/about/research-team/faculty/tom.html
Organization name Dartmouth Medical School
Department Pharm/Tox
Lab Bruce Stanton
Street address North College Street
City Hanover
State/province NH
ZIP/Postal code 03755
Country USA
 
Platforms (1)
GPL570 [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array
Samples (16)
GSM754979 CF CFTR unexposed replicate 1
GSM754980 CF CFTR unexposed replicate 2
GSM754981 CF CFTR unexposed replicate 3
Relations
BioProject PRJNA143521

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE30439_RAW.tar 80.9 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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