|
| Status |
Public on Nov 06, 2011 |
| Title |
Genome-wide binding map of the HIV Tat protein to the human genome |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by array
Genome binding/occupancy profiling by genome tiling array
Genome binding/occupancy profiling by high throughput sequencing
|
| Summary |
This SuperSeries is composed of the SubSeries listed below.
|
| |
|
| Overall design |
Refer to individual Series
|
| |
|
| Citation(s) |
22073215 |
| |
| Submission date |
Jul 18, 2011 |
| Last update date |
May 15, 2019 |
| Contact name |
Siavash K Kurdistani |
| E-mail(s) |
Skurdistani@mednet.ucla.edu
|
| Phone |
310-794-5194
|
| Fax |
310 206-5272
|
| Organization name |
University of California Los Angeles
|
| Department |
Biological Chemistry
|
| Street address |
615 Charles E. Young Dr. South, 337
|
| City |
Los Angeles |
| State/province |
CA |
| ZIP/Postal code |
90095 |
| Country |
USA |
| |
|
| Platforms (3) |
| GPL7031 |
Agilent Whole Human Genome Oligo Microarray - custom annotation |
| GPL7032 |
Human Promoter ChIP-on-chip Microarray - custom annotation |
| GPL9115 |
Illumina Genome Analyzer II (Homo sapiens) |
|
| Samples (5)
|
| GSM762821 |
Jurkat Tat cells vs. Jurkat cells replicate 1 |
| GSM762822 |
Jurkat Tat cells vs. Jurkat cells replicate 2 |
| GSM762829 |
Jurkat Tat cells vs Jurkat cells H3K9ac ChIP-chip |
|
| This SuperSeries is composed of the following SubSeries: |
| GSE30734 |
Genome-wide binding map of the HIV Tat protein to the human genome (gene expression) |
| GSE30736 |
Genome-wide binding map of the HIV Tat protein to the human genome (ChIP-chip) |
| GSE30738 |
Genome-wide binding map of the HIV Tat protein to the human genome (ChIP-Seq) |
|
| Relations |
| BioProject |
PRJNA144139 |
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