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Series GSE32292 Query DataSets for GSE32292
Status Public on Mar 15, 2012
Title How post-translational modification of nitrogenase is circumvented in Rhodopseudomonas palustris strains that produce hydrogen gas constitutively
Organism Rhodopseudomonas palustris
Experiment type Expression profiling by array
Summary Characterization of post-translational modification of nitrogenase in Rhodopseudomonas palustris strains that produce hydrogen gas constitutively.
 
Overall design To characterize the effect of yeast extract as nitrogen source on gene expression under nitrogen fixing conditions, expression profiles of wild-type cells grown on either NF plus yeast extract and succinate and PM plus ammonium sulfate and succinate were compared using Affymetrix GeneChip. Using NF plus yeast extract and succinate media, transcriptome profiles of various mutants and wild-type cells were compared using glass spotted microarrays.
 
Contributor(s) Heiniger EK, Oda Y, Samanta SK, Harwood CS
Citation(s) 22179236
Submission date Sep 21, 2011
Last update date Mar 23, 2012
Contact name Yasuhiro Oda
E-mail(s) yasuhiro@uw.edu
Organization name University of Washington
Department Department of Microbiology
Lab Harwood
Street address Box 357242, 1705 N.E. Pacific Street, HSB K-354
City Seattle
State/province WA
ZIP/Postal code 98195-7242
Country USA
 
Platforms (2)
GPL2697 Rhodopseudomonas palustris whole genome microarray
GPL3954 Affymetrix Rhodopseudomonas palustris GeneChip 2
Samples (22)
GSM798294 Rhodopseudomonas palustris cells grown on PM with succinate #1
GSM798299 Rhodopseudomonas palustris cells grown on PM with succinate #2
GSM798300 Rhodopseudomonas palustris cells NF with succinate and yeast extract #1
Relations
BioProject PRJNA146363

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE32292_RAW.tar 48.4 Mb (http)(custom) TAR (of CEL, TXT)
Processed data included within Sample table
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