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Series GSE33192 Query DataSets for GSE33192
Status Public on Dec 31, 2011
Title miRNA expression profile in leprosy skin biopsy specimens
Organism Homo sapiens
Experiment type Non-coding RNA profiling by array
Summary Skin biopsy specimens of skin lesions were profiled for miRNA expression.
In this study, we indentified miRNA species that were differentially expressed in the skin lesions of either the lepromatous or tuberculoid forms of leprosy. One miRNA species, hsa-mir-21, found in the lepromatous lesions was capable of downregulating the vitamin D-dependent antimicrobial pathway.
 
Overall design Scalpel or punch skin biopsy specimens were obtained after informed consent from patients with tuberculoid leprosy and patients with lepromatous leprosy at the time of diagnosis. Specimens were embedded in OCT medium, snap-frozen in liquid nitrogen and stored at 80°C until sectioning.
 
Contributor(s) Liu PT, Modlin RL
Citation(s) 22286305
Submission date Oct 24, 2011
Last update date Apr 02, 2012
Contact name Philip T. Liu
E-mail(s) ptliu@mednet.ucla.edu
Phone 310-206-8457
Organization name University of California at Los Angeles
Department Department of Orthopaedic Surgery
Lab Liu Lab
Street address 615 Charles E Young Drive South, 410 OHRC
City Los Angeles
State/province CA
ZIP/Postal code 90095
Country USA
 
Platforms (1)
GPL14777 Ambion 14K miRChip V1 [expanded format]
Samples (11)
GSM821604 Lepromatous Patient 1
GSM821605 Lepromatous Patient 2
GSM821606 Lepromatous Patient 4
Relations
BioProject PRJNA149241

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE33192_RAW.tar 4.0 Mb (http)(custom) TAR (of CEL, TXT)
Processed data included within Sample table

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