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Series GSE33983 Query DataSets for GSE33983
Status Public on Apr 01, 2012
Title Array comparative genomic hybridization in oral cavity (head and neck) squamous cell carcinoma
Organism Homo sapiens
Experiment type Genome variation profiling by genome tiling array
Summary Genome wide high resolution assay of copy number in a series of frozen, microdissected head and neck cancers originating from the oral cavity.
The objective was to characterize areas of amplification and deletion in head and neck cancers arising from the oral cavity subsite.
 
Overall design 31 tumors were snap frozen at the time of surgical resection, microdissected to >70% tumor content, and DNA extracted.
 
Contributor(s) Morris LG, Chan TA
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Submission date Nov 28, 2011
Last update date Dec 06, 2012
Contact name Luc GT Morris
Organization name Memorial Sloan-Kettering Cancer Center
Street address 1275 York Avenue
City New York
State/province NY
ZIP/Postal code 10065
Country USA
 
Platforms (1)
GPL8736 Agilent-021529 Human CGH Whole Genome Microarray 1x1M (G4447A) (Feature Number version)
Samples (31)
GSM840038 Tumor 414
GSM840039 Tumor 1339
GSM840040 Tumor 1421
Relations
BioProject PRJNA150617

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE33983_RAW.tar 8.2 Gb (http)(custom) TAR (of TXT)
Processed data included within Sample table
Processed data provided as supplementary file

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