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Series GSE34658 Query DataSets for GSE34658
Status Public on Dec 22, 2011
Title Genome-wide profiling of DNA methylation in two Arabidopsis ecotypes and their reciprocal hybrids
Organism Arabidopsis thaliana
Experiment type Expression profiling by high throughput sequencing
Non-coding RNA profiling by high throughput sequencing
Methylation profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 22438023
Submission date Dec 22, 2011
Last update date May 15, 2019
Contact name Hang He
E-mail(s) hehang@gmail.com
Organization name Yale University
Department MCDB
Lab Deng Xing-Wang
Street address 165 Prospect St
City New Haven
State/province CT
ZIP/Postal code 06511
Country USA
 
Platforms (1)
GPL9062 Illumina Genome Analyzer (Arabidopsis thaliana)
Samples (40)
GSM852808 mRNA-seq in Ler, technical replicate 1
GSM852809 mRNA-seq in Ler, technical replicate 2
GSM852810 mRNA-seq in Ler, technical replicate 3
This SuperSeries is composed of the following SubSeries:
GSE34655 Genome-wide profiling of DNA methylation in two Arabidopsis ecotypes and their reciprocal hybrids - mRNA-seq
GSE34656 Genome-wide profiling of DNA methylation in two Arabidopsis ecotypes and their reciprocal hybrids - small RNA-seq
GSE34657 Genome-wide profiling of DNA methylation in two Arabidopsis ecotypes and their reciprocal hybrids - Bisulfite-seq
Relations
BioProject PRJNA151235

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE34658_RAW.tar 29.7 Gb (http)(custom) TAR (of BOWTIE, MAP)
SRA Run SelectorHelp

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