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| Status |
Public on Dec 28, 2011 |
| Title |
Expression analysis of Nanog-like-MO1 injected zebrafish embryos at the sphere stage |
| Organism |
Danio rerio |
| Experiment type |
Expression profiling by array
|
| Summary |
Investigation of whole genome gene expression level changes in nanog-like knockdown embryos , compared to the control-MO injected embryos. Knockdown of nanog-like impaired early gastrulation.
To globally analyze which target genes Nanog-like regulates during early embryogenesis, we performed a genome-wide transcription analysis using sphere stage (4 hpf) nanog-like morphants.
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| Overall design |
A six chip study using total RNA recovered from three separate control-MO injected embryos and three separate nanog-like-MO1 injected embryos at the sphere stage
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| |
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| Contributor(s) |
Xu C, Zon LI |
| Citation(s) |
22421047 |
| |
| Submission date |
Dec 22, 2011 |
| Last update date |
Apr 03, 2012 |
| Contact name |
Cong Xu |
| E-mail(s) |
congxu@fas.harvard.edu
|
| Organization name |
Harvard Medical School
|
| Street address |
1 Blackfan Circle
|
| City |
Boston |
| State/province |
MA |
| ZIP/Postal code |
02134 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL14375 |
NimbleGen Danio rerio [100718_Zv7_EXPR] |
|
| Samples (6)
|
| GSM853228 |
sphere stage zebrafish embryo_control-MO_rep1 |
| GSM853229 |
sphere stage zebrafish embryo_control-MO_rep2 |
| GSM853230 |
sphere stage zebrafish embryo_control-MO_rep3 |
| GSM853231 |
sphere stage zebrafish embryo_nanog-like-MO1_rep1 |
| GSM853232 |
sphere stage zebrafish embryo_nanog-like-MO1_rep2 |
| GSM853233 |
sphere stage zebrafish embryo_nanog-like-MO1_rep3 |
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| This SubSeries is part of SuperSeries: |
| GSE34684 |
Nanog-like Regulates Endoderm Formation through the Mxtx2-Nodal Pathway |
|
| Relations |
| BioProject |
PRJNA156231 |
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