|
Status |
Public on Dec 28, 2011 |
Title |
Expression analysis of Nanog-like-MO1 injected zebrafish embryos at the sphere stage |
Organism |
Danio rerio |
Experiment type |
Expression profiling by array
|
Summary |
Investigation of whole genome gene expression level changes in nanog-like knockdown embryos , compared to the control-MO injected embryos. Knockdown of nanog-like impaired early gastrulation. To globally analyze which target genes Nanog-like regulates during early embryogenesis, we performed a genome-wide transcription analysis using sphere stage (4 hpf) nanog-like morphants.
|
|
|
Overall design |
A six chip study using total RNA recovered from three separate control-MO injected embryos and three separate nanog-like-MO1 injected embryos at the sphere stage
|
|
|
Contributor(s) |
Xu C, Zon LI |
Citation(s) |
22421047 |
|
Submission date |
Dec 22, 2011 |
Last update date |
Apr 03, 2012 |
Contact name |
Cong Xu |
E-mail(s) |
congxu@fas.harvard.edu
|
Organization name |
Harvard Medical School
|
Street address |
1 Blackfan Circle
|
City |
Boston |
State/province |
MA |
ZIP/Postal code |
02134 |
Country |
USA |
|
|
Platforms (1) |
GPL14375 |
NimbleGen Danio rerio [100718_Zv7_EXPR] |
|
Samples (6)
|
GSM853228 |
sphere stage zebrafish embryo_control-MO_rep1 |
GSM853229 |
sphere stage zebrafish embryo_control-MO_rep2 |
GSM853230 |
sphere stage zebrafish embryo_control-MO_rep3 |
GSM853231 |
sphere stage zebrafish embryo_nanog-like-MO1_rep1 |
GSM853232 |
sphere stage zebrafish embryo_nanog-like-MO1_rep2 |
GSM853233 |
sphere stage zebrafish embryo_nanog-like-MO1_rep3 |
|
This SubSeries is part of SuperSeries: |
GSE34684 |
Nanog-like Regulates Endoderm Formation through the Mxtx2-Nodal Pathway |
|
Relations |
BioProject |
PRJNA156231 |