|
| Status |
Public on Oct 01, 2012 |
| Title |
Expression analysis of purified intestinal phagocytes in Schmidtea mediterranea |
| Organism |
Schmidtea mediterranea |
| Experiment type |
Expression profiling by array
|
| Summary |
Identification of differentially expressed genes in intestinal phagocytes, compared to non-intestinal cells in Schmidtea mediterranea.
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| |
|
| Overall design |
Total RNA was isolated from either intestinal phagocytes or non-intestinal cells (control). Four independent biological replicates were conducted with two dye swaps. Labeled targets were hybridized to two oligonucleotide arrays on which 11,521 planarian transcripts were represented.
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| |
|
| Contributor(s) |
Forsthoefel DJ, James NP, Escobar DE, Stary JM, Vieira AP, Waters FA, Newmark PA |
| Citation(s) |
23079596 |
| |
| Submission date |
Feb 06, 2012 |
| Last update date |
Dec 20, 2012 |
| Contact name |
Noelle James |
| Organization name |
U of IL / HHMI
|
| Department |
Cell and Developmental Biology
|
| Lab |
Newmark Lab
|
| Street address |
601 S. Goodwin Ave.
|
| City |
Urbana |
| State/province |
IL |
| ZIP/Postal code |
61801 |
| Country |
USA |
| |
|
| Platforms (2) |
| GPL15192 |
UIUC/Newmark-Smed1 CombiMatrix array |
| GPL15193 |
UIUC/Newmark-Smed2 CombiMatrix array |
|
| Samples (8)
|
| GSM870713 |
Intestinal vs. control SmedArray1-Biorep1 |
| GSM870714 |
Intestinal vs. control SmedArray1-Biorep2 |
| GSM870715 |
Intestinal vs. control SmedArray1-Biorep3 |
| GSM870716 |
Intestinal vs. control SmedArray1-Biorep4 |
| GSM870717 |
Intestinal vs. control SmedArray2-Biorep1 |
| GSM870718 |
Intestinal vs. control SmedArray2-Biorep2 |
| GSM870719 |
Intestinal vs. control SmedArray2-Biorep3 |
| GSM870720 |
Intestinal vs. control SmedArray2-Biorep4 |
|
| Relations |
| BioProject |
PRJNA152211 |
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