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Series GSE37421 Query DataSets for GSE37421
Status Public on Apr 20, 2012
Title Genes differentially expressed Haloferax mediterranei strains: control wild-type strain vs ΔphaEC strain
Organism Haloferax mediterranei
Experiment type Expression profiling by array
Summary Transcriptional profiling of Haloferax mediterranei comparing control wild-type strain with ΔphaEC strain, in which PHA synthase genes are knockouted. ΔphaEC strain is deficient in PHBV accumulation. Goal was to explore the PHBV biosynthetic pathway and to determine their impact on primary metabolism in H. mediterranei.
Overall design Total RNA from the control Haloferax mediterranei and its ΔphaEC strain were used to generate target cDNA, and then hybridized to 8*15K Haloferax mediterranei genome array genechips, representing about 3800 genes.
Contributor(s) Han J
Citation(s) 23435886
Submission date Apr 19, 2012
Last update date Jun 06, 2013
Contact name Jing Han
Organization name Institute of Microbiology, Chinese Academy of Sciences
Street address NO.1 West Beichen Road, Chaoyang District
City Beijing
ZIP/Postal code 100101
Country China
Platforms (1)
GPL15465 Agilent-035154 HFM87_33500_exp_v2
Samples (6)
GSM918874 control wild-type strain vs ΔphaEC strain replicate 1
GSM918875 control wild-type strain vs ΔphaEC strain replicate 2
GSM918876 control wild-type strain vs ΔphaEC strain replicate 3
BioProject PRJNA160123

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE37421_RAW.tar 4.4 Mb (http)(custom) TAR (of LSR)
Processed data included within Sample table

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