GEO Accession viewer

NCBI > GEO > Accession Display

Not logged in | Login

GEO help: Mouse over screen elements for information.

Series GSE38478

Query DataSets for GSE38478

Status

Public on Apr 25, 2013

Title

Evolutionary principles of modular gene regulation in Yeasts

Organisms

Schizosaccharomyces pombe; Schizosaccharomyces japonicus; Lachancea waltii; Saccharomyces cerevisiae; Candida albicans; Nakaseomyces glabratus; Naumovozyma castellii; Kluyveromyces lactis

Experiment type

Expression profiling by array

Summary

Comparative time-series expression analysis of growth curves through carbon depletion in the ascomycete yeasts.

Overall design

Each of the following species-specific, growth curve derived samples competitively hybed to their own mid-log samples: lag phase, late log, diauxic shift, post-shift, plateau.

Contributor(s)

Thompson D, Wapinski I, Roy S

Citation(s)

23640720

Submission date

Jun 05, 2012

Last update date

Jul 01, 2013

Contact name

Ilan Wapinski

E-mail(s)

ilan@broadinstitute.org

Organization name

Broad Institute

Lab

Aviv Regev

Street address

7 Cambridge Center

City

Cambridge

State/province

ZIP/Postal code

02140

Country

USA

Platforms (9)

More...

GPL9294	Agilent-015072 Yeast Oligo Microarray 4x44K G2519F (Probe Name version)
GPL10497	Agilent Custom Gene Expression Array for Candida glabrata
GPL10498	Agilent Custom Gene Expression Array for Candida albicans

Samples (205)

More...

GSM940711	251507210461_1_2-T15[C(5)/C(3)]
GSM940712	251507210461_1_3-T30[C(5)/C(3)]
GSM940713	251507210461_1_4-T60[C(5)/C(3)]

GSM940714	251507210461_1_1-T5[C(5)/C(3)]
GSM940715	251983810011_1_2-T15[A(5)/A(3)]
GSM940716	251983810011_2_4-T60[B(5)/B(3)]
GSM940717	251983810011_2_1-T5[B(5)/B(3)]
GSM940718	251983810011_2_2-T15[B(5)/B(3)]
GSM940719	251983810011_1_3-T30[A(5)/A(3)]
GSM940720	251983810011_1_1-T5[A(5)/A(3)]
GSM940721	251983810011_1_4-T60[A(5)/A(3)]
GSM940722	251983810011_2_3-T30[B(5)/B(3)]
GSM940723	252035310001_2_3-T30[B(5)/B(3)]
GSM940724	252035310008_2_1-T5[C(5)/C(3)]
GSM940725	252035310001_2_2-T15[B(5)/B(3)]
GSM940726	252035310008_2_4-T60[C(5)/C(3)]
GSM940727	252035310008_1_2-T15[A(5)/A(3)]
GSM940728	252035310001_2_1-T5[B(5)/B(3)]
GSM940729	252035310001_2_4-T60[B(5)/B(3)]
GSM940730	252035310008_2_3-T30[C(5)/C(3)]
GSM940731	252035310008_1_3-T30[A(5)/A(3)]
GSM940732	252035310008_1_1-T5[A(5)/A(3)]
GSM940733	252035310008_1_4-T60[A(5)/A(3)]
GSM940734	252035310008_2_2-T15[C(5)/C(3)]
GSM940735	252035410002_2_1-T5[D(5)/D(3)]
GSM940736	252035410009_1_3-T30[B(5)/B(3)]
GSM940737	252035410009_1_4-T60[B(5)/B(3)]
GSM940738	252035410002_1_4-T60[A(5)/A(3)]
GSM940739	252035410009_2_1-T5[C(5)/C(3)]
GSM940740	252035410002_2_2-T15[D(5)/D(3)]
GSM940741	252035410009_2_2-T15[C(5)/C(3)]
GSM940742	252035410002_2_3-T30[D(5)/D(3)]
GSM940743	252035410009_1_2-T15[B(5)/B(3)]
GSM940744	252035410002_1_2-T15[A(5)/A(3)]
GSM940745	252035410002_2_4-T60[D(5)/D(3)]
GSM940746	252035410009_2_4-T60[C(5)/C(3)]
GSM940747	252035410009_2_3-T30[C(5)/C(3)]
GSM940748	252035410002_1_3-T30[A(5)/A(3)]
GSM940749	252035410002_1_1-T5[A(5)/A(3)]
GSM940750	252035410009_1_1-T5[B(5)/B(3)]
GSM940751	252035510008_1_4-T60[A(5)/A(3)]
GSM940752	252035510014_1_1-T5[C(5)/C(3)]
GSM940753	252035510008_2_4-T60[B(5)/B(3)]
GSM940754	252035510008_2_1-T5[B(5)/B(3)]
GSM940755	252035510014_1_2-T15[C(5)/C(3)]
GSM940756	252035510008_2_2-T15[B(5)/B(3)]
GSM940757	252035510008_1_1-T5[A(5)/A(3)]
GSM940758	252035510008_1_2-T15[A(5)/A(3)]
GSM940759	252035510008_1_3-T30[A(5)/A(3)]
GSM940760	252035510014_1_4-T60[C(5)/C(3)]
GSM940761	252035510008_2_3-T30[B(5)/B(3)]
GSM940762	252035510014_1_3-T30[C(5)/C(3)]
GSM940763	251983910019_1_4-T60[C(5)/C(3)]
GSM940764	251983910019_1_1-T5[C(5)/C(3)]
GSM940765	251983910019_2_4-T60[D(5)/D(3)]
GSM940766	251983910019_1_3-T30[C(5)/C(3)]
GSM940767	251983910006_1_2-T15[A(5)/A(3)]
GSM940768	251983910006_2_4-T60[B(5)/B(3)]
GSM940769	251983910006_2_1-T5[B(5)/B(3)]
GSM940770	251983910019_2_3-T30[D(5)/D(3)]
GSM940771	251983910006_2_3-T30[B(5)/B(3)]
GSM940772	251983910006_1_4-T60[A(5)/A(3)]
GSM940773	251983910006_1_3-T30[A(5)/A(3)]
GSM940774	251983910019_2_2-T15[D(5)/D(3)]
GSM940775	251983910006_2_2-T15[B(5)/B(3)]
GSM940776	251983910006_1_1-T5[A(5)/A(3)]
GSM940777	251983910019_1_2-T15[C(5)/C(3)]
GSM940778	251983910019_2_1-T5[D(5)/D(3)]
GSM940786	251507210462_1_3-T30[A(5)/A(3)]
GSM940787	251507210472_1_2-T15[E(5)/E(3)]
GSM940788	251507210504_1_3-T30[D(5)/D(3)]
GSM940789	251507210473_1_1-T5[F(5)/F(3)]
GSM940790	251507210462_1_4-T60[A(5)/A(3)]
GSM940791	251507210504_1_2-T15[D(5)/D(3)]
GSM940792	251507210462_1_2-T15[A(5)/A(3)]
GSM940793	251507210473_1_3-T30[F(5)/F(3)]
GSM940794	251507210463_1_2-T15[B(5)/B(3)]
GSM940795	251507210463_1_1-T5[B(5)/B(3)]
GSM940796	251507210473_1_4-T60[F(5)/F(3)]
GSM940797	251507210472_1_3-T30[E(5)/E(3)]
GSM940798	251507210504_1_4-T60[D(5)/D(3)]
GSM940799	251507210473_1_2-T15[F(5)/F(3)]
GSM940800	251507210462_1_1-T5[A(5)/A(3)]
GSM940801	251507210463_1_4-T60[B(5)/B(3)]
GSM940802	251507210472_1_1-T5[E(5)/E(3)]
GSM940803	251507210472_1_4-T60[E(5)/E(3)]
GSM940804	251507210504_1_1-T5[D(5)/D(3)]
GSM940805	251507210463_1_3-T30[B(5)/B(3)]
GSM940806	252035310005_1_4-T15[D(5)/D(3)]
GSM940807	252035310005_1_3-T5[D(5)/D(3)]
GSM940808	252035310002_2_1-T5[C(5)/C(3)]
GSM940809	252035310002_2_2-T15[C(5)/C(3)]
GSM940810	252035310005_2_2-T60[D(5)/D(3)]
GSM940811	252035310002_2_4-T60[C(5)/C(3)]
GSM940812	252035310002_1_4-T60[B(5)/B(3)]
GSM940813	252035310002_2_3-T30[C(5)/C(3)]
GSM940814	252035310005_2_1-T30[D(5)/D(3)]
GSM940815	252035310002_1_1-T5[B(5)/B(3)]
GSM940816	252035310002_1_2-T15[B(5)/B(3)]
GSM940817	252035310002_1_3-T30[B(5)/B(3)]
GSM940818	252035410008_2_1-T5[B(5)/B(3)]
GSM940819	252035410008_2_4-T60[B(5)/B(3)]
GSM940820	252035410008_2_2-T15[B(5)/B(3)]
GSM940821	252035410008_1_2-T15[A(5)/A(3)]
GSM940822	252035410008_2_3-T30[B(5)/B(3)]
GSM940823	252035410008_1_1-T5[A(5)/A(3)]
GSM940824	252035410008_1_4-T60[A(5)/A(3)]
GSM940825	252035410008_1_3-T30[A(5)/A(3)]
GSM940826	252035510007_1_4-T60[B(5)/A(3)]
GSM940827	252035510007_1_3-T30[B(5)/A(3)]
GSM940828	252035510007_2_2-T15[C(5)/C(3)]
GSM940829	252035510007_2_4-T60[C(5)/C(3)]
GSM940830	252035510007_2_3-T30[C(5)/C(3)]
GSM940831	252035510007_1_1-T5[B(5)/A(3)]
GSM940832	252035510007_2_1-T5[C(5)/C(3)]
GSM940833	252035510007_1_2-T15[B(5)/A(3)]
GSM940834	251983910022_2_3-T30[C(5)/C(3)]
GSM940835	251983910013_1_2-T15[A(5)/A(3)]
GSM940836	251983910013_1_1-T5[A(5)/A(3)]
GSM940837	251983910022_2_4-T60[C(5)/C(3)]
GSM940838	251983910022_2_2-T15[C(5)/C(3)]
GSM940839	251983910013_1_4-T60[A(5)/A(3)]
GSM940840	251983910013_2_4-T60[B(5)/B(3)]
GSM940841	251983910013_2_2-T15[B(5)/B(3)]
GSM940842	251983910013_1_3-T30[A(5)/A(3)]
GSM940843	251983910013_2_3-T30[B(5)/B(3)]
GSM940844	251983910013_2_1-T5[B(5)/B(3)]
GSM940845	251983910022_2_1-T5[C(5)/C(3)]
GSM942986	251507210474_1_4-T45[A(5)/A(3)]
GSM942987	251507210474_1_2-T15[A(5)/A(3)]
GSM942988	251507210475_1_3-T15[B(5)/B(3)]
GSM942989	251507210475_1_2-T5[B(5)/B(3)]
GSM942990	251507210474_1_1-T5[A(5)/A(3)]
GSM942991	251507210475_1_4-T30[B(5)/B(3)]
GSM942992	251507210474_1_3-T30[A(5)/A(3)]
GSM942993	251507210475_1_1-T60[A(5)/A(3)]
GSM942994	252061310013_2_1-T5[B(5)/B(3)]
GSM942995	252061310013_1_3-T30[A(5)/A(3)]
GSM942996	252061310013_2_2-T15[B(5)/B(3)]
GSM942997	252061310013_1_1-T5[A(5)/A(3)]
GSM942998	252061310013_1_4-T60[A(5)/A(3)]
GSM942999	252061310013_1_2-T15[A(5)/A(3)]
GSM943000	252061310013_2_3-T30[B(5)/B(3)]
GSM943001	252061310013_2_4-T60[B(5)/B(3)]
GSM943002	252153510004_2_3-T15[A(5)/A(3)]
GSM943003	252153510008_2_3-T60[B(5)/B(3)]
GSM943004	252153510004_2_4-T15[B(5)/B(3)]
GSM943005	252153510008_2_1-T15[B(5)/B(3)]
GSM943006	252153510008_1_2-T30[A(5)/A(3)]
GSM943007	252153510008_1_4-T30[A(5)/A(3)]
GSM943008	252153510008_2_2-T45[B(5)/B(3)]
GSM943009	252153510008_1_1-T5[A(5)/A(3)]
GSM943010	252153510008_1_3-T60[A(5)/A(3)]
GSM943011	252153510008_2_4-T15[B(5)/B(3)]
GSM943012	252035310005_1_1-T45[B(5)/B(3)]
GSM943013	252035310004_2_1-T60[A(5)/A(3)]
GSM943014	252035310004_1_4-T45[A(5)/A(3)]
GSM943015	252035310004_2_2-T5[B(5)/B(3)]
GSM943016	252035310004_1_2-T15[A(5)/A(3)]
GSM943017	252035310004_1_3-T30[A(5)/A(3)]
GSM943018	252035310004_1_1-T5[A(5)/A(3)]
GSM943019	252035310004_2_3-T15[B(5)/B(3)]
GSM943020	252035310004_2_4-T30[B(5)/B(3)]
GSM943021	252035310005_1_2-T60[B(5)/B(3)]
GSM943022	252047310006_1_4-T60[A(5)/A(3)]
GSM943023	252047310006_2_4-T60[B(5)/B(3)]
GSM943024	252047310006_1_1-T15[A(5)/A(3)]
GSM943025	252047310009_2_3-T5[A(5)/A(3)]
GSM943026	252047310006_2_1-T15[B(5)/B(3)]
GSM943027	252047310006_1_3-T45[A(5)/A(3)]
GSM943028	252047310009_2_4-T5[B(5)/B(3)]
GSM943029	252047310006_1_2-T30[A(5)/A(3)]
GSM943030	252047310006_2_2-T30[B(5)/B(3)]
GSM943031	252047310006_2_3-T45[B(5)/B(3)]
GSM943032	252035410012_1_4-T45[A(5)/A(3)]
GSM943033	252035410016_2_4-T60[B(5)/B(3)]
GSM943034	252035410012_1_1-T5[A(5)/A(3)]
GSM943035	252035410012_2_1-T5[B(5)/B(3)]
GSM943036	252035410016_2_3-T60[A(5)/A(3)]
GSM943037	252035410012_2_3-T30[B(5)/B(3)]
GSM943038	252035410012_1_3-T30[A(5)/A(3)]
GSM943039	252035410012_1_2-T15[A(5)/A(3)]
GSM943040	252035410012_2_2-T15[B(5)/B(3)]
GSM943041	252035410012_2_4-T45[B(5)/B(3)]
GSM943042	252035510015_2_2-T15[B(5)/B(3)]
GSM943043	252035510023_1_1-T60[A(5)/A(3)]
GSM943044	252035510015_1_3-T30[A(5)/A(3)]
GSM943045	252035510015_1_1-T5[A(5)/A(3)]
GSM943046	252035510023_1_2-T60[B(5)/B(3)]
GSM943047	252035510015_1_4-T45[A(5)/A(3)]
GSM943048	252035510015_2_3-T30[B(5)/B(3)]
GSM943049	252035510015_2_1-T5[B(5)/B(3)]
GSM943050	252035510015_2_4-T45[B(5)/B(3)]
GSM943051	252035510015_1_2-T15[A(5)/A(3)]
GSM943052	251983910024_2_1-T60[A(5)/A(3)]
GSM943053	251983910021_1_1-T45[B(5)/B(3)]
GSM943054	251983910028_2_3-T45[A(5)/A(3)]
GSM943055	251983910024_1_1-T5[A(5)/A(3)]
GSM943056	251983910024_2_2-T5[B(5)/B(3)]
GSM943057	251983910024_2_3-T15[B(5)/B(3)]
GSM943058	251983910021_1_2-T60[B(5)/B(3)]
GSM943059	251983910024_1_2-T15[A(5)/A(3)]
GSM943060	251983910024_1_3-T30[A(5)/A(3)]
GSM943061	251983910024_2_4-T30[B(5)/B(3)]
GSM943062	251983910024_1_4-T45[A(5)/A(3)]

Relations

BioProject

PRJNA168172

Download family	Format
SOFT formatted family file(s)	SOFT
MINiML formatted family file(s)	MINiML
Series Matrix File(s)	TXT

Supplementary file	Size	Download	File type/resource
GSE38478_RAW.tar	969.3 Mb	(http)(custom)	TAR (of TXT)
Processed data included within Sample table