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| Status |
Public on May 27, 2013 |
| Title |
Mechanisms of age-dependent response to winter temperature in perennial flowering of Arabis alpina. |
| Platform organism |
Arabidopsis thaliana |
| Sample organism |
Arabis alpina |
| Experiment type |
Expression profiling by array
|
| Summary |
Transcriptomic profile of Arabis alpina apex enriched material. We compared apices from plants grown for 2 weeks in long days (20°C) (juvenile) with apices from plants grown for 8 weeks in long days (20°C) (adult) and apices from plants grown for 2 weeks and then shifted in vernalization for 4 weeks with apices from plants grown for 8 weeks and than shifted to vernalization for 4 weeks.
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| |
|
| Overall design |
2x2 factorial design. 2 starting ages (2 weeks and 8 weeks) and 2 developmental conditions (before and after vernalization). 4 biological replicates for each condition (16 arrays). Reference: pool of the 16 arrays.
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| |
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| Contributor(s) |
Bergonzi S, Ver Loren van Themaat E, Coupland G |
| Citation(s) |
23723236 |
| Submission date |
Aug 29, 2012 |
| Last update date |
Jun 05, 2013 |
| Contact name |
Emiel Ver Loren van Themaat |
| E-mail(s) |
themaat@mpiz-koeln.mpg.de
|
| Organization name |
Max Planck Institute
|
| Street address |
Carl von linneweg
|
| City |
Cologne |
| ZIP/Postal code |
50823 |
| Country |
Germany |
| |
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| Platforms (1) |
| GPL16007 |
Agilent-018261 Coupland Lab (MPIPZ)-Arabidopsis/Arabis-244K |
|
| Samples (16)
|
| GSM994453 |
apices_2 weeks in long day_Repl 4 |
| GSM994454 |
apices_2 weeks + 4 weeks Vernalization_Repl 1 |
| GSM994455 |
apices_2 weeks + 4 weeks Vernalization_Repl 2 |
| GSM994456 |
apices_2 weeks + 4 weeks Vernalization_Repl 3 |
| GSM994457 |
apices_2 weeks + 4 weeks Vernalization_Repl 4 |
| GSM994458 |
apices_8 weeks in long day_Repl 1 |
| GSM994459 |
apices_8 weeks in long day_Repl 2 |
| GSM994460 |
apices_8 weeks in long day_Repl 3 |
| GSM994461 |
apices_8 weeks in long day_Repl 4 |
| GSM994462 |
apices_8 weeks + 4 weeks Vernalization_Repl 1 |
| GSM994463 |
apices_8 weeks + 4 weeks Vernalization_Repl 2 |
| GSM994464 |
apices_8 weeks + 4 weeks Vernalization_Repl 3 |
| GSM994465 |
apices_8 weeks + 4 weeks Vernalization_Repl 4 |
|
| Relations |
| BioProject |
PRJNA174078 |
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