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| Status |
Public on Jan 30, 2014 |
| Title |
Methylation profiling categorizes HIV-associated lymphomas in two distinctive groups |
| Organism |
Homo sapiens |
| Experiment type |
Methylation profiling by array
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| Summary |
HIV-positive patients have a higher risk of non-Hodgkin's lymphoma with poor prognostic features. To characterize features of HIV-associated lymphoma, we compared the DNA methylation profiles of 803 cancer-related genes in between 9 HIV-associated and 12 non-HIV lymphoma samples by Illumina GoldenGate Methylation Cancer Panel I microarray.
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| Overall design |
Bisulfite-converted DNA from the 42 samples (duplicate analysis of 21 samples) were analyzed to obtain the methylation profiles of cancer-associated genes by using Illumina GoldenGate Methylation Cancer Panel I microarray.
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| Contributor(s) |
Matsunaga A, Hishima T, Tanaka N, Yamazaki M, Motizuki M, Ishizaka Y, Shimura M, Hagiwara S |
| Citation(s) |
24335480 |
| |
| Submission date |
Nov 29, 2012 |
| Last update date |
Jan 30, 2014 |
| Contact name |
Akihiro Matsunaga |
| E-mail(s) |
amatsunaga@ri.ncgm.go.jp
|
| Phone |
+81-3-3202-7181
|
| Organization name |
National Center for Global Health and Medicine
|
| Department |
Intractable Disease
|
| Street address |
1-21-1, Toyama
|
| City |
Shinjuku |
| State/province |
Tokyo |
| ZIP/Postal code |
162-8655 |
| Country |
Japan |
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| Platforms (1) |
| GPL9183 |
Illumina GoldenGate Methylation Cancer Panel I |
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| Samples (42)
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| Relations |
| BioProject |
PRJNA182372 |
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