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Series GSE42699 Query DataSets for GSE42699
Status Public on Sep 01, 2013
Title MicroRNA expression in prostate cancer cells stimulated with cancer associated fibroblasts
Organism Homo sapiens
Experiment type Non-coding RNA profiling by array
Summary Tumor microenvironment is a strong determinant for the acquisition of metastatic potential of cancer cells. It has been demonstrated (Giannoni E et al., Cancer Res 2010) that cancer associated fibroblasts (CAF) elicit an epithelial-mesenchymal transition (EMT) in prostate cancer (PCa) cells, leading to enhanced tumor cell aggressiveness. Here, we investigated the involvement of microRNAs (miRNA) in such malignant tumor-stroma interplay, to identify possible tools to counteract metastasis dissemination.
 
Overall design To verify whether specific miRNAs are involved in CAF-induced EMT in PCa cells, PC-3 cells were subjected to a variety of stimuli, known to induce or not the acquisition of a mesenchymal phenotype (Giannoni E et al., Cancer Res 2010; Giannoni E et al., Antioxid Redox Signal 2011) , and profiled for miRNA expression on a microarray platform. miRNA expression profiles successfully distinguished cells that underwent EMT following the stimulation with activated fibroblasts (here referred to as “mesenchymal”) from cells that did not (“epithelial”).
 
Contributor(s) Gandellini P
Citation(s) 23924028
Submission date Dec 03, 2012
Last update date Feb 18, 2019
Contact name Paolo Gandellini
E-mail(s) paolo.gandellini@istitutotumori.mi.it
Organization name Fondazione IRCCS Istituto Nazionale Tumori
Department Department of Applied Research and Technological Development
Street address Via Amadeo 42
City Milan
ZIP/Postal code 20133
Country Italy
 
Platforms (1)
GPL8179 Illumina Human v2 MicroRNA expression beadchip
Samples (9)
GSM1048124 Unstimulated PC-3 cells
GSM1048125 PC-3 cells stimulated with the conditioned medium from prostatic fibroblasts
GSM1048126 PC-3 cells stimulated with the conditioned medium from prostatic fibroblasts, previously activated with TGF-β
Relations
BioProject PRJNA182757

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE42699_RAW.tar 70.0 Kb (http)(custom) TAR
GSE42699_non-normalized.txt.gz 59.9 Kb (ftp)(http) TXT
Processed data included within Sample table

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