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GEO accession:
Series GSE43002
Query DataSets for GSE43002
Status
Public on Jul 24, 2013
Title
The yeast Snt2 protein helps coordinate the transcriptional response to hydrogen-peroxide mediated oxidative stress
Organism
Saccharomyces cerevisiae
Experiment type
Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
23878396
Submission date
Dec 18, 2012
Last update date
May 15, 2019
Contact name
David Allis
Organization name
The Rockefeller University
Department
Laboratory of Chromatin Biology and Epigenetics
Lab
Allis Laboratory
Street address
1230 York Ave Box 78
City
New York
State/province
NY
ZIP/Postal code
10065
Country
USA
Platforms (1)
GPL13821
Illumina HiSeq 2000 (Saccharomyces cerevisiae)
Samples (66)
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GSM1054128
SNT2_0hrs__H2O2Expt_ChIP
GSM1054129
SNT2_0.5hrs__H2O2Expt_ChIP
GSM1054130
SNT2_4hrs__H2O2Expt_ChIP
GSM1054131
ECM5_0hrs__H2O2Expt_ChIP
GSM1054132
ECM5_0.5hrs__H2O2Expt_ChIP
GSM1054133
ECM5_4hrs__H2O2Expt_ChIP
GSM1054134
untagged_0hrs__H2O2Expt_ChIP
GSM1054135
untagged_0.5hrs__H2O2Expt_ChIP
GSM1054136
untagged_4hrs__H2O2Expt_ChIP
GSM1054137
SNT2_0hrs__H2O2Expt_Input
GSM1054138
SNT2_0.5hrs__H2O2Expt_Input
GSM1054139
SNT2_4hrs__H2O2Expt_Input
GSM1054140
ECM5_0hrs__H2O2Expt_Input
GSM1054141
ECM5_0.5hrs__H2O2Expt_Input
GSM1054142
ECM5_4hrs__H2O2Expt_Input
GSM1054143
untagged_0hrs__H2O2Expt_Input
GSM1054144
untagged_0.5hrs__H2O2Expt_Input
GSM1054145
untagged_4hrs__H2O2Expt_Input
GSM1054393
WT_0hrs_rep1
GSM1054394
WT_0hrs_rep2
GSM1054395
WT_0hrs_rep3
GSM1054396
WT_0.5hrs_rep1
GSM1054397
WT_0.5hrs_rep2
GSM1054398
WT_0.5hrs_rep3
GSM1054399
snt2D_0hrs_rep1
GSM1054400
snt2D_0hrs_rep2
GSM1054401
snt2D_0hrs_rep3
GSM1054402
snt2D_0.5hrs_rep1
GSM1054403
snt2D_0.5hrs_rep2
GSM1054404
snt2D_0.5hrs_rep3
GSM1054405
ecm5D_0hrs_rep1
GSM1054406
ecm5D_0hrs_rep2
GSM1054407
ecm5D_0hrs_rep3
GSM1054408
ecm5D_0.5hrs_rep1
GSM1054409
ecm5D_0.5hrs_rep2
GSM1054410
ecm5D_0.5hrs_rep3
GSM1054735
SNT2_0hrs_beforetreatment_RapExpt_ChIP
GSM1054736
SNT2_0.5hrs_DMSO_RapExpt_ChIP
GSM1054737
SNT2_0.5hrs_RAP_RapExpt_ChIP
GSM1054738
SNT2_4hrs_DMSO_RapExpt_ChIP
GSM1054739
SNT2_4hrs_RAP_RapExpt_ChIP
GSM1054740
ECM5_0hrs_beforetreatment_RapExpt_ChIP
GSM1054741
ECM5_0.5hrs_DMSO_RapExpt_ChIP
GSM1054742
ECM5_0.5hrs_RAP_RapExpt_ChIP
GSM1054743
ECM5_4hrs_DMSO_RapExpt_ChIP
GSM1054744
ECM5_4hrs_RAP_RapExpt_ChIP
GSM1054745
untagged_0hrs_beforetreatment_RapExpt_ChIP
GSM1054746
untagged_0.5hrs_DMSO_RapExpt_ChIP
GSM1054747
untagged_0.5hrs_RAP_RapExpt_ChIP
GSM1054748
untagged_4hrs_DMSO_RapExpt_ChIP
GSM1054749
untagged_4hrs_RAP_RapExpt_ChIP
GSM1054750
SNT2_0hrs_beforetreatment_RapExpt_Input
GSM1054751
SNT2_0.5hrs_DMSO_RapExpt_Input
GSM1054752
SNT2_0.5hrs_RAP_RapExpt_Input
GSM1054753
SNT2_4hrs_DMSO_RapExpt_Input
GSM1054754
SNT2_4hrs_RAP_RapExpt_Input
GSM1054755
ECM5_0hrs_beforetreatment_RapExpt_Input
GSM1054756
ECM5_0.5hrs_DMSO_RapExpt_Input
GSM1054757
ECM5_0.5hrs_RAP_RapExpt_Input
GSM1054758
ECM5_4hrs_DMSO_RapExpt_Input
GSM1054759
ECM5_4hrs_RAP_RapExpt_Input
GSM1054760
untagged_0hrs_beforetreatment_RapExpt_Input
GSM1054761
untagged_0.5hrs_DMSO_RapExpt_Input
GSM1054762
untagged_0.5hrs_RAP_RapExpt_Input
GSM1054763
untagged_4hrs_DMSO_RapExpt_Input
GSM1054764
untagged_4hrs_RAP_RapExpt_Input
This SuperSeries is composed of the following SubSeries:
GSE42971
The yeast Snt2 protein helps coordinate the transcriptional response to hydrogen-peroxide mediated oxidative stress (H2O2)
GSE42983
The yeast Snt2 protein helps coordinate the transcriptional response to hydrogen-peroxide mediated oxidative stress (RNA-seq)
GSE43001
The yeast Snt2 protein helps coordinate the transcriptional response to hydrogen-peroxide mediated oxidative stress (rapamycin or DMSO)
Relations
BioProject
PRJNA184042
Download family
Format
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TXT
Supplementary file
Size
Download
File type/resource
GSE43002_RAW.tar
129.4 Mb
(http)
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TAR (of WIG)
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