NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE44424 Query DataSets for GSE44424
Status Public on Sep 13, 2016
Title Global CpG Methylation profiling of donor cells, induced pluripotent stem cells, and human embryonic stem cells
Organism Homo sapiens
Experiment type Methylation profiling by array
Summary Global CpG methylation profiling using Illumina 27k Infinium platform of (a) human embryonic stem cells, (b) low passage episomal stromal-primed myeloid iPSC, (c) intermediate passage fibroblast iPSC, and (d) samples of corresponding donor cells.
 
Overall design Genomic DNA was harvested from indicated donor cells, hESC, or iPSC. A single sample of each cell line was used for this analysis.
 
Contributor(s) Park TS, Pandiyan K, Huo JS, Talbot CC, Yu W, Verma K, Peters A, Reijo-Pera R, Baylin SB, Zambidis ET
Citation(s) 27660325
Submission date Feb 20, 2013
Last update date Dec 13, 2016
Contact name Elias Thomas Zambidis
Organization name Johns Hopkins School of Medicine
Department Oncology
Street address 733 N. Broadway
City Baltimore
State/province MD
ZIP/Postal code 21205
Country USA
 
Platforms (1)
GPL8490 Illumina HumanMethylation27 BeadChip (HumanMethylation27_270596_v.1.2)
Samples (43)
GSM1084905 nonviral 7F stromal primed cord blood iPSC clone 19.11 p14 DNA Methylome
GSM1084906 nonviral 7F stromal primed cord blood iPSC clone 6.11 p14 DNA Methylome
GSM1084907 nonviral 7F stromal primed cord blood iPSC clone 6.13 p14 DNA Methylome
This SubSeries is part of SuperSeries:
GSE44430 Comprehensive microarray analysis of reprogramming fidelity in a library of non-integrated induced pluripotent stem cell lines prepared with various derivation methods
Relations
BioProject PRJNA189961

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE44424.txt.gz 406 b (ftp)(http) TXT
GSE44424_RAW.tar 5.8 Mb (http)(custom) TAR
GSE44424_signal_intensities.txt.gz 5.9 Mb (ftp)(http) TXT
Processed data included within Sample table
| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap