Bisulphite-converted (EZ DNA methylation kit) DNA was amplified, fragmented and hybridized to Illumina Infinium Human Methylation27 Beadchip using the standard Illumina protocol.
Scan protocol
Arrays were imaged using the BeadArray Reader using the standard recommended Illumina scanner setting.
Description
Individual sample
Data processing
Data were extracted with Methylation Module in GenomeStudio to obtain signal intensities from multiple chips comprising this single series.
Comprehensive microarray analysis of reprogramming fidelity in a library of non-integrated induced pluripotent stem cell lines prepared with various derivation methods