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Series GSE44628 Query DataSets for GSE44628
Status Public on Feb 04, 2014
Title Expression analysis of HFF cells in G1 phase
Organism Homo sapiens
Experiment type Expression profiling by genome tiling array
Summary Whole transcriptome expression analysis of HFF cells on Affymetrix Human Tiling 1.0 array set. Cells were synchronised by serum starvation and transcriptome-wide expression in G1 phase was assessed by using TileShuffle (Otto C, Reiche K, Hackermüller J. "Detection of differentially expressed segments in tiling array data". Bioinformatics. 2012 Jun 1;28(11):1471-9. Epub 2012 Apr 6.).
 
Overall design We analyzed one Affymetrix Human Tiling 1.0R set
 
Contributor(s) Hackermüller J, Reiche K, Otto C, Hösler N, Brocke-Heidrich K, Böhlig L, Kasack K, Ahnert P, Krupp W, Engeland K, Stalder PF, Horn F
Citation(s) 24594072
Submission date Feb 25, 2013
Last update date May 09, 2014
Contact name Kristin Reiche
E-mail(s) kristin.reiche@izi.fraunhofer.de
Organization name Fraunhofer Institute for Cell Therapy and Immunology
Department Diagnostics
Street address Perlickstr. 1
City Leipzig
ZIP/Postal code 04103
Country Germany
 
Platforms (14)
GPL6156 [Hs35b_M01R] Affymetrix Human Tiling 1.0R Set, Array 1
GPL6157 [Hs35b_M02R] Affymetrix Human Tiling 1.0R Set, Array 2
GPL6158 [Hs35b_M03R] Affymetrix Human Tiling 1.0R Set, Array 3
Samples (14)
GSM1088068 Whole transcriptome analysis of HFF cells using TileShuffle (G1 phase)
GSM1088069 Whole transcriptome analysis of HFF cells using TileShuffle (G1 phase)
GSM1088070 Whole transcriptome analysis of HFF cells using TileShuffle (G1 phase)
This SubSeries is part of SuperSeries:
GSE44631 Differential expression analysis of HFF cells in G0 phase compared to cells in G1
GSE44632 Differential expression analysis of HFF cells in G1 phase compared to cells in S
Relations
BioProject PRJNA190696

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE44628_RAW.tar 330.0 Mb (http)(custom) TAR (of BED, CEL)
Processed data provided as supplementary file

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