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Status |
Public on Feb 04, 2014 |
Title |
Expression analysis of INA6 cells after IL-6 restimulation |
Organism |
Homo sapiens |
Experiment type |
Expression profiling by genome tiling array
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Summary |
Whole transcriptome expression analysis of INA6 cells on Affymetrix Human Tiling 1.0 array set. Cells were restimulated with IL-6 for 1 hour after IL-6 has been withdrawn for 13 hours. Transcriptome-wide expression data was assessed by using TileShuffle (Otto C, Reiche K, Hackermüller J. "Detection of differentially expressed segments in tiling array data". Bioinformatics. 2012 Jun 1;28(11):1471-9. Epub 2012 Apr 6.).
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Overall design |
We analyzed one Affymetrix Human Tiling 1.0R set
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Contributor(s) |
Hackermüller J, Reiche K, Otto C, Hösler N, Brocke-Heidrich K, Böhlig L, Kasack K, Ahnert P, Krupp W, Engeland K, Stalder PF, Horn F |
Citation(s) |
24594072 |
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Submission date |
Feb 25, 2013 |
Last update date |
May 09, 2014 |
Contact name |
Kristin Reiche |
E-mail(s) |
kristin.reiche@izi.fraunhofer.de
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Organization name |
Fraunhofer Institute for Cell Therapy and Immunology
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Department |
Diagnostics
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Street address |
Perlickstr. 1
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City |
Leipzig |
ZIP/Postal code |
04103 |
Country |
Germany |
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Platforms (14)
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GPL6156 |
[Hs35b_M01R] Affymetrix Human Tiling 1.0R Set, Array 1 |
GPL6157 |
[Hs35b_M02R] Affymetrix Human Tiling 1.0R Set, Array 2 |
GPL6158 |
[Hs35b_M03R] Affymetrix Human Tiling 1.0R Set, Array 3 |
GPL6159 |
[Hs35b_M04R] Affymetrix Human Tiling 1.0R Set, Array 4 |
GPL6160 |
[Hs35b_M05R] Affymetrix Human Tiling 1.0R Set, Array 5 |
GPL6161 |
[Hs35b_M06R] Affymetrix Human Tiling 1.0R Set, Array 6 |
GPL6162 |
[Hs35b_M07R] Affymetrix Human Tiling 1.0R Set, Array 7 |
GPL6163 |
[Hs35b_M08R] Affymetrix Human Tiling 1.0R Set, Array 8 |
GPL6164 |
[Hs35b_M09R] Affymetrix Human Tiling 1.0R Set, Array 9 |
GPL6165 |
[Hs35b_M10R] Affymetrix Human Tiling 1.0R Set, Array 10 |
GPL6166 |
[Hs35b_M11R] Affymetrix Human Tiling 1.0R Set, Array 11 |
GPL6167 |
[Hs35b_M12R] Affymetrix Human Tiling 1.0R Set, Array 12 |
GPL6168 |
[Hs35b_M13R] Affymetrix Human Tiling 1.0R Set, Array 13 |
GPL6169 |
[Hs35b_M14R] Affymetrix Human Tiling 1.0R Set, Array 14 |
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Samples (14)
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GSM1088450 |
Whole transcriptome analysis of INA6 cells using TileShuffle (IL-6 restimulation) |
GSM1088451 |
Whole transcriptome analysis of INA6 cells using TileShuffle (IL-6 restimulation) |
GSM1088452 |
Whole transcriptome analysis of INA6 cells using TileShuffle (IL-6 restimulation) |
GSM1088453 |
Whole transcriptome analysis of INA6 cells using TileShuffle (IL-6 restimulation) |
GSM1088454 |
Whole transcriptome analysis of INA6 cells using TileShuffle (IL-6 restimulation) |
GSM1088455 |
Whole transcriptome analysis of INA6 cells using TileShuffle (IL-6 restimulation) |
GSM1088456 |
Whole transcriptome analysis of INA6 cells using TileShuffle (IL-6 restimulation) |
GSM1088457 |
Whole transcriptome analysis of INA6 cells using TileShuffle (IL-6 restimulation) |
GSM1088458 |
Whole transcriptome analysis of INA6 cells using TileShuffle (IL-6 restimulation) |
GSM1088459 |
Whole transcriptome analysis of INA6 cells using TileShuffle (IL-6 restimulation) |
GSM1088460 |
Whole transcriptome analysis of INA6 cells using TileShuffle (IL-6 restimulation) |
GSM1088461 |
Whole transcriptome analysis of INA6 cells using TileShuffle (IL-6 restimulation) |
GSM1088462 |
Whole transcriptome analysis of INA6 cells using TileShuffle (IL-6 restimulation) |
GSM1088463 |
Whole transcriptome analysis of INA6 cells using TileShuffle (IL-6 restimulation) |
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This SubSeries is part of SuperSeries: |
GSE44659 |
Differential expression analysis of INA6 cells |
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Relations |
BioProject |
PRJNA190883 |
Supplementary file |
Size |
Download |
File type/resource |
GSE44656_RAW.tar |
285.2 Mb |
(http)(custom) |
TAR (of BED, CEL) |
Processed data provided as supplementary file |
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