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GEO accession:
Series GSE44690
Query DataSets for GSE44690
Status
Public on Mar 26, 2013
Title
An Ancient Transcription Factor Initiates the Burst of piRNA Production During Early Meiosis in Mouse Testes
Organisms
Gallus gallus
;
Mus musculus
Experiment type
Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Other
Non-coding RNA profiling by high throughput sequencing
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
23523368
Submission date
Feb 26, 2013
Last update date
May 15, 2019
Contact name
Christian Roy
Organization name
Umass Med
Street address
364 Plantation St
City
Worcester
State/province
Massachusetts
ZIP/Postal code
01605
Country
USA
Platforms (4)
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GPL9250
Illumina Genome Analyzer II (Mus musculus)
GPL9385
Illumina Genome Analyzer II (Gallus gallus)
GPL13112
Illumina HiSeq 2000 (Mus musculus)
GPL16133
Illumina HiSeq 2000 (Gallus gallus)
Samples (56)
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GSM1087281
Mouse A-MYB ChIPSeq
GSM1087282
Mouse H3K4me3_ChIPSeq
GSM1087283
Mouse Pol II ChIPSeq
GSM1087284
Mouse Input DNA ChIPSeq
GSM1087285
Rooster A-MYB ChIPSeq
GSM1087286
Rooster H3K4me3_ChIPSeq
GSM1087287
Rooster Input DNA ChIPSeq
GSM1088420
wild.type.42.rnaseq
GSM1088421
wild.type.10.rnaseq
GSM1088422
wild.type.12.rnaseq
GSM1088423
wild.type.14.rnaseq
GSM1088424
wild.type.17.rnaseq
GSM1088425
wild.type.20.rnaseq
GSM1088426
amyb.het.14.rnaseq
GSM1088427
amyb.het.17.rnaseq
GSM1088428
amyb.mut.14.rnaseq
GSM1088429
amyb.mut.17.rnaseq
GSM1088430
miwi.het.14.rnaseq
GSM1088431
miwi.het.17.rnaseq
GSM1088432
miwi.mut.14.rnaseq
GSM1088433
miwi.mut.17.rnaseq
GSM1096579
Wild Type 10.5 dpp CAGE
GSM1096580
Wild Type Adult CAGE
GSM1096581
Wild Type Adult PAS
GSM1096582
Mouse Wild Type 10.5 dpp small RNA
GSM1096583
Mouse Wild Type 12.5 dpp small RNA
GSM1096584
Mouse Wild Type 14.5 dpp small RNA
GSM1096585
Mouse Wild Type 17.5 dpp small RNA
GSM1096586
Mouse Wild Type 20.5 dpp small RNA
GSM1096587
Mouse Wild Type 6 weeks dpp small RNA
GSM1096588
Mouse A-Myb Heterozygous 14.5 dpp small RNA
GSM1096589
Mouse A-Myb Heterozygous 17.5 dpp small RNA
GSM1096590
Mouse A-Myb Mutant 14.5 dpp small RNA
GSM1096591
Mouse A-Myb Mutant 17.5 dpp small RNA
GSM1096592
Mouse Miwi Heterozygous 14.5 dpp small RNA
GSM1096593
Mouse Miwi Heterozygous 17.5 dpp small RNA
GSM1096594
Mouse Miwi Mutant 14.5 dpp small RNA
GSM1096595
Mouse Miwi Mutant 17.5 dpp small RNA
GSM1096596
Mouse Spo11 Mutant 14.5 dpp small RNA
GSM1096597
Mouse Spo11 Heterozygous 14.5 dpp small RNA
GSM1096598
Rooster Wild Type Adult small RNA
GSM1096599
Mouse Wild Type 10.5 dpp Oxidized small RNA
GSM1096600
Mouse Wild Type 12.5 dpp Oxidized small RNA
GSM1096601
Mouse Wild Type 14.5 dpp Oxidized small RNA
GSM1096602
Mouse Wild Type 17.5 dpp Oxidized small RNA
GSM1096603
Mouse Wild Type 20.5 dpp Oxidized small RNA
GSM1096604
Mouse Wild Type 6 weeks dpp Oxidized small RNA
GSM1096605
Mouse A-Myb Heterozygous 14.5 dpp Oxidized small RNA
GSM1096606
Mouse A-Myb Heterozygous 17.5 dpp Oxidized small RNA
GSM1096607
Mouse A-Myb Mutant 14.5 dpp Oxidized small RNA
GSM1096608
Mouse A-Myb Mutant 17.5 dpp Oxidized small RNA
GSM1096609
Mouse Miwi Heterozygous 14.5 dpp Oxidized small RNA
GSM1096610
Mouse Miwi Heterozygous 17.5 dpp Oxidized small RNA
GSM1096611
Mouse Miwi Mutant 14.5 dpp Oxidized small RNA
GSM1096612
Mouse Miwi Mutant 17.5 dpp Oxidized small RNA
GSM1096613
Rooster Wild Type Adult Oxidized small RNA
This SuperSeries is composed of the following SubSeries:
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GSE44588
An Ancient Transcription Factor Initiates the Burst of piRNA Production During Early Meiosis in Mouse Testes (ChIP-Seq)
GSE44654
An Ancient Transcription Factor Initiates the Burst of piRNA Production During Early Meiosis in Mouse Testes (RNA-Seq)
GSE45048
An Ancient Transcription Factor An Ancient Transcription Factor During Early Meiosis in Mouse Testes (PAS-Seq and CAGE)
GSE45049
An Ancient Transcription Factor Initiates the Burst of piRNA Production During Early Meiosis in Mouse Testes (smallRNA-Seq)
Relations
BioProject
PRJNA190937
Download family
Format
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Supplementary file
Size
Download
File type/resource
GSE44690_RAW.tar
2.5 Mb
(http)
(custom)
TAR (of BED)
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