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Series GSE46046 Query DataSets for GSE46046
Status Public on Apr 08, 2014
Title Transcriptome analysis reveals an activation of MHC-I and MHC-II pathways in chicken trachea immunized with infectious laryngotracheitis virus vaccine
Organism Gallus gallus
Experiment type Expression profiling by high throughput sequencing
Summary Infectious laryngotracheitis (ILT) is an acute, contagious, upper respiratory disease, which is caused by gallid herpesvirus 1 (GaHV-1). Due to the mortality rates up to 70% depending on the virulence of the virus, it is of economic importance of the disease to explore the etiology of the ILT in the poultry industry. In this study, 15-day-old SPF white leghorn chickens were used to transcriptome analysis in chicken trachea immunized with infectious laryngotracheitis virus vaccine. In conclusion, chicken embryo origin (CEO) vaccine activation of the MHC-I and MHC-II pathways provides insight into the molecular mechanism of immune response in chickens, and holds potential for evaluation and design of new ILT vaccines in a manner adapted to the host immune response to the virus.
 
Overall design Ten vaccine inoculated birds were randomly divided in two groups. Each group represents one replication of five pooled tissues, for inoculated birds. Control group consists of five birds that received sterile vaccine diluent.
 
Contributor(s) Carrillo JA, Luo J, Menendez KR, Tablante NL, Zhao K, Song J
Citation(s) 24706961
Submission date Apr 15, 2013
Last update date May 15, 2019
Contact name Jose Adrian Carrillo
E-mail(s) carrillo@umd.edu
Organization name University of Maryland
Department Department of Animal and Avian Sciences
Lab Song's lab
Street address 1413 Animal Sciences Center
City College Park
State/province MD
ZIP/Postal code 20742-2311
Country USA
 
Platforms (1)
GPL16133 Illumina HiSeq 2000 (Gallus gallus)
Samples (3)
GSM1122509 ILTV_RNASeq_Control
GSM1122510 ILTV_RNASeq_Inoculated_1
GSM1122511 ILTV_RNASeq_Inoculated_2
Relations
BioProject PRJNA197130
SRA SRP021074

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE46046_Count_Normalized.txt.gz 222.5 Kb (ftp)(http) TXT
GSE46046_GenesTable.txt.gz 765.6 Kb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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