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Series GSE46383 Query DataSets for GSE46383
Status Public on Jul 01, 2013
Title Expression from Staphylococcus aureus strain USA300-lac during low and 2M NaCl exposure
Platform organism Staphylococcus aureus
Sample organism Staphylococcus aureus subsp. aureus USA300
Experiment type Expression profiling by array
Summary S. aureus has the propensity to survive a range of NaCl challenge conditions
We used commercially available Affymetrix S. aureus GeneChips (part number 900514) to compare the gene expression properties of wild type cells during growth at no or high (2M) NaCl.
 
Overall design S. aureus strain USA300-lac cells were grown to late exponential phase growth in the absence or presence of 2M NaCl, total bacterial RNA was isolated and subjected to GeneChip hybridization and analysis. We sought to determine the regulatory effects of high NaCl.
 
Contributor(s) Dunman PM, Krulwich TA
Citation(s) 23963175
Submission date Apr 25, 2013
Last update date Sep 05, 2013
Contact name Paul Dunman
E-mail(s) paul_dunman@urmc.rochester.edu
Phone 585-276-5700
Organization name University of Rochester
Department Microbiology and Immunology
Street address 601 Elmwood Avenue
City Rochester
State/province NY
ZIP/Postal code 14642
Country USA
 
Platforms (1)
GPL1339 [S_aureus] Affymetrix S. aureus Genome Array
Samples (4)
GSM1129540 Exponential No NaCl, biological rep 1
GSM1129541 Exponential No NaCl, biological rep 2
GSM1129542 Exponential 2M NaCl, biological rep 1
Relations
BioProject PRJNA198901

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE46383_RAW.tar 4.7 Mb (http)(custom) TAR (of CEL, CHP)
Processed data included within Sample table
Processed data provided as supplementary file

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