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| Status |
Public on Aug 02, 2013 |
| Title |
Expression data from Arabidopsis thaliana seedlings |
| Organism |
Arabidopsis thaliana |
| Experiment type |
Expression profiling by array
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| Summary |
Light pulses at the end of the day or night be able to control the phase of the circadian clock. Pulses in the middle of the night has not effect on the circadian oscilations.
To understand how the circadian clock gate the light signal in the middle of the night we used microarrays to characterize the light effect in the whole expression profile.
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| Overall design |
Plants of Arabidopsis thalina (Columbia ecotype) were grown in 12/12 light/dark cicles for 15 days and then were tranfer to continuous dark .
Plants were slplit in two groups. First group recieved 1hr light pulse in the middle of the night (Night treatment), second group recieve 1hr light pulse in the middle of the subjective day (Day Treatment).
Samples of both groups were collected without light pulse named as a control.
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| Contributor(s) |
Rugnone M, Yanovsky M |
| Citation(s) |
23818596 |
| Submission date |
May 03, 2013 |
| Last update date |
Aug 15, 2018 |
| Contact name |
Marcelo Yanovsky |
| E-mail(s) |
myanovsky@leloir.org.ar
|
| Organization name |
Fundación Instituto Leloir. IIBBA- CONICET
|
| Lab |
Laboratorio de Genómica Comparativa del Desarrollo Vegetal
|
| Street address |
Av. Patricias Argentinas 435
|
| City |
Buenos Aires |
| State/province |
Ciudad Autonoma de Buenos Aires |
| ZIP/Postal code |
C1405BWE |
| Country |
Argentina |
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| Platforms (1) |
| GPL198 |
[ATH1-121501] Affymetrix Arabidopsis ATH1 Genome Array |
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| Samples (12)
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| This SubSeries is part of SuperSeries: |
| GSE46741 |
Arabidopsis circadian regulatory networks |
|
| Relations |
| Affiliated with |
GSE69995 |
| BioProject |
PRJNA201242 |
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