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Series GSE47589 Query DataSets for GSE47589
Status Public on Jul 01, 2013
Title Transcriptome analysis of Escherichia coli C strains (wt and PKH5000, a butanol-tolerant mutant) after 1-butanol treatment
Organism Escherichia coli
Experiment type Expression profiling by array
Summary The goal of this study is to explore genes that are differentially expressed in E. coli C strains (wt and a butanol-tolerant mutant) after 1-butanol treatment. The butanol-tolerant mutant strain PKH5000 (denoted by 'E' for 'evolved') were derived from KCTC 2571 (wt) (denoted by 'A' for 'ancestral') by proton beam irradiation.
0 and 1 in sample title mean before and after butanol treatment, respectively.
 
Overall design All microarray experiments were carried out in triplicate (rep1-3). Probes were spotted in duplicate on separate area of each microarray slide, which produces two GPR files (a and b suffixes).
 
Contributor(s) Jeong H, Kim SH
Citation(s) 28335589
Submission date Jun 03, 2013
Last update date Sep 08, 2017
Contact name Haeyoung Jeong
E-mail(s) hyjeong@kribb.re.kr
Phone +82 42 860 4237
Fax +82 42 879 8519
Organization name KRIBB
Street address 125 Gwahak-ro, Yuseong-gu
City Daejeon
ZIP/Postal code 305-806
Country South Korea
 
Platforms (1)
GPL7395 MGAC_Ecoli_v1.0
Samples (18)
GSM1152845 A0-A1_rep1_a
GSM1152846 A0-A1_rep1_b
GSM1152847 A0-A1_rep2_a
Relations
BioProject PRJNA206430

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE47589_RAW.tar 11.1 Mb (http)(custom) TAR (of GPR)
Processed data included within Sample table

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